Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 MIR630-201ENST00000384957 97 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 FGF7P7-201ENST00000514120 227 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU6-478P-201ENST00000363904 110 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 SNORD116-2-201ENST00000384274 95 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 MIR548A3-201ENST00000385297 97 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU6-578P-201ENST00000390980 103 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNA5SP136-201ENST00000410906 107 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 MTND4LP1-201ENST00000446263 157 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU7-169P-201ENST00000459456 61 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU7-123P-201ENST00000515911 60 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 SNORD116-25-201ENST00000516517 92 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 RNA5SP106-201ENST00000517274 100 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 VN1R91P-201ENST00000594377 169 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 MIR3974-201ENST00000637126 96 ntBASIC-0.45□□□□□ -2.48
COL7A1Q02388 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-698P-201ENST00000363523 107 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-34P-201ENST00000364874 107 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-608P-201ENST00000383927 104 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-80P-201ENST00000384195 107 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 MIR759-201ENST00000390224 91 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-823P-201ENST00000391042 103 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 MTATP6P21-201ENST00000440681 189 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 SNORA40.15-201ENST00000516884 107 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU5F-1-201ENST00000362507 117 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-937P-201ENST00000384325 106 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 SNORD58.1-201ENST00000391313 66 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-982P-201ENST00000516216 102 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 MIR4748-201ENST00000578076 82 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 MIR3121-201ENST00000579680 77 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.46□□□□□ -2.48
COL7A1Q02388 RNU6-79P-201ENST00000362511 107 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNU6-924P-201ENST00000362926 108 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNU6-238P-201ENST00000363313 106 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNY4P14-201ENST00000363656 96 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 SNORA7.5-201ENST00000410672 110 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MTND3P3-201ENST00000505004 126 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNU6-240P-201ENST00000516098 97 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNY3P15-201ENST00000516297 97 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MIR3170-201ENST00000582699 77 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 AC090582.1-201ENST00000636321 199 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 AC073869.6-201ENST00000640656 341 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 SNORD115-37-201ENST00000363768 82 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 SNORD18B-201ENST00000365659 72 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MIR620-201ENST00000385232 95 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 SNORA18.5-201ENST00000516616 101 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 RNU7-151P-201ENST00000516930 53 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MIR5688-201ENST00000580619 83 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MIR3163-201ENST00000581592 73 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 AC078883.4-201ENST00000623218 367 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 MTND4LP32-201ENST00000636111 270 ntBASIC-0.47□□□□□ -2.48
COL7A1Q02388 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 RNY4P9-201ENST00000363194 97 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 RNU6-624P-201ENST00000363411 107 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 RNU6-841P-201ENST00000383872 107 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 RNU6-974P-201ENST00000384099 108 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.48□□□□□ -2.49
COL7A1Q02388 SNORD127-201ENST00000458892 86 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 SNORA40.14-201ENST00000516543 86 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.48□□□□□ -2.49
COL7A1Q02388 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 549.8 ms