Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU7-159P-201ENST00000459284 62 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 FGF7P7-201ENST00000514120 227 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 SNORA18.5-201ENST00000516616 101 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 RNU6-719P-201ENST00000516671 104 ntBASIC-0.08□□□□□ -2.42
CDH11P55287 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 RNU6-44P-201ENST00000384045 107 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 MIR106A-201ENST00000384870 81 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CDH11P55287 SNORD42B-201ENST00000458893 67 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 MIR6514-201ENST00000622549 70 ntBASIC-0.09□□□□□ -2.42
CDH11P55287 SNORD114-29-201ENST00000364819 70 ntBASIC-0.1□□□□□ -2.43
CDH11P55287 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.43
CDH11P55287 MIR148A-201ENST00000362215 68 ntBASIC-0.11□□□□□ -2.43
CDH11P55287 RNU4-32P-201ENST00000363404 141 ntBASIC-0.11□□□□□ -2.43
CDH11P55287 SNORA40.13-201ENST00000516379 120 ntBASIC-0.11□□□□□ -2.43
CDH11P55287 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
CDH11P55287 RNU6-640P-201ENST00000363693 105 ntBASIC-0.12□□□□□ -2.43
CDH11P55287 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.12□□□□□ -2.43
CDH11P55287 MIR20A-201ENST00000362279 71 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-495P-201ENST00000362995 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-32P-201ENST00000383948 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-13P-201ENST00000384248 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-905P-201ENST00000384434 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-12P-201ENST00000384604 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 RNU6-41P-201ENST00000384741 107 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 MIR329-2-201ENST00000385029 84 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 AC244090.1-201ENST00000441884 93 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.13□□□□□ -2.43
CDH11P55287 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.14□□□□□ -2.43
CDH11P55287 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
CDH11P55287 MALAT1.1-201ENST00000618249 95 ntBASIC-0.14□□□□□ -2.43
CDH11P55287 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
CDH11P55287 SNORD115-27-201ENST00000364430 82 ntBASIC-0.15□□□□□ -2.43
CDH11P55287 RNU6-46P-201ENST00000383860 107 ntBASIC-0.15□□□□□ -2.43
CDH11P55287 RNU7-24P-201ENST00000458867 62 ntBASIC-0.15□□□□□ -2.43
CDH11P55287 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
CDH11P55287 MIR6507-201ENST00000613630 70 ntBASIC-0.15□□□□□ -2.43
CDH11P55287 RNY4P3-201ENST00000365254 95 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MIR488-201ENST00000365739 83 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MIR1236-201ENST00000408340 102 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MTATP6P29-201ENST00000415057 132 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 RNU6-762P-201ENST00000517107 102 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MIR4796-201ENST00000580742 81 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
CDH11P55287 MIR655-201ENST00000362159 97 ntBASIC-0.17□□□□□ -2.44
CDH11P55287 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
CDH11P55287 SNORA49-201ENST00000386157 136 ntBASIC-0.17□□□□□ -2.44
CDH11P55287 snoU13.17-201ENST00000458802 104 ntBASIC-0.17□□□□□ -2.44
CDH11P55287 MIR6759-201ENST00000638110 65 ntBASIC-0.17□□□□□ -2.44
CDH11P55287 SNORD114-4-201ENST00000363962 75 ntBASIC-0.18□□□□□ -2.44
CDH11P55287 MIR582-201ENST00000365731 98 ntBASIC-0.18□□□□□ -2.44
CDH11P55287 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CDH11P55287 MIR548E-201ENST00000408287 88 ntBASIC-0.18□□□□□ -2.44
CDH11P55287 RNU7-153P-201ENST00000516455 62 ntBASIC-0.18□□□□□ -2.44
CDH11P55287 RNU6-633P-201ENST00000362612 103 ntBASIC-0.19□□□□□ -2.44
CDH11P55287 RNU6-497P-201ENST00000365316 104 ntBASIC-0.19□□□□□ -2.44
CDH11P55287 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CDH11P55287 SNORD75.2-201ENST00000408784 58 ntBASIC-0.19□□□□□ -2.44
CDH11P55287 MIR4668-201ENST00000582284 70 ntBASIC-0.19□□□□□ -2.44
CDH11P55287 AC145423.2-201ENST00000610631 239 ntBASIC-0.19□□□□□ -2.44
CDH11P55287 RNA5SP98-201ENST00000363158 137 ntBASIC-0.2□□□□□ -2.44
CDH11P55287 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.2□□□□□ -2.44
CDH11P55287 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.2□□□□□ -2.44
CDH11P55287 AC244250.2-201ENST00000418731 148 ntBASIC-0.2□□□□□ -2.44
CDH11P55287 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
CDH11P55287 RNU6-219P-201ENST00000364728 107 ntBASIC-0.21□□□□□ -2.44
CDH11P55287 RNU6-824P-201ENST00000363724 104 ntBASIC-0.22□□□□□ -2.44
CDH11P55287 RNU6-153P-201ENST00000364422 104 ntBASIC-0.22□□□□□ -2.44
CDH11P55287 MIR519C-201ENST00000385053 87 ntBASIC-0.22□□□□□ -2.44
CDH11P55287 AC097510.1-201ENST00000510945 133 ntBASIC-0.22□□□□□ -2.44
CDH11P55287 RNU6-168P-201ENST00000516189 101 ntBASIC-0.22□□□□□ -2.44
CDH11P55287 RNU5F-1-201ENST00000362507 117 ntBASIC-0.23□□□□□ -2.45
CDH11P55287 RNU6-382P-201ENST00000365181 106 ntBASIC-0.23□□□□□ -2.45
CDH11P55287 RNA5SP89-201ENST00000410300 108 ntBASIC-0.23□□□□□ -2.45
CDH11P55287 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
CDH11P55287 SNORD116-22-201ENST00000384430 92 ntBASIC-0.24□□□□□ -2.45
CDH11P55287 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
CDH11P55287 SNORA40.17-201ENST00000517256 115 ntBASIC-0.24□□□□□ -2.45
CDH11P55287 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
CDH11P55287 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
CDH11P55287 SNORD49B-201ENST00000365172 72 ntBASIC-0.25□□□□□ -2.45
CDH11P55287 RNY1P7-201ENST00000384743 110 ntBASIC-0.25□□□□□ -2.45
CDH11P55287 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
CDH11P55287 SNORD2-201ENST00000459163 69 ntBASIC-0.26□□□□□ -2.45
CDH11P55287 RNU6-267P-201ENST00000516714 103 ntBASIC-0.26□□□□□ -2.45
CDH11P55287 U6.81-201ENST00000612550 106 ntBASIC-0.26□□□□□ -2.45
CDH11P55287 RNU6-990P-201ENST00000364385 104 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 SNORD114-12-201ENST00000365400 75 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 RNU6-675P-201ENST00000384236 104 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 MIR9-2-201ENST00000384838 87 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 RNU6-402P-201ENST00000410678 103 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 AC006254.2-201ENST00000603259 279 ntBASIC-0.27□□□□□ -2.45
CDH11P55287 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms