Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-175P-201ENST00000516896 107 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 MIR655-201ENST00000362159 97 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 RNU6-789P-201ENST00000517105 102 ntBASIC-0.42□□□□□ -2.48
NEK3P51956 RNU6-766P-201ENST00000362478 107 ntBASIC-0.43□□□□□ -2.48
NEK3P51956 MIR4802-201ENST00000581881 80 ntBASIC-0.43□□□□□ -2.48
NEK3P51956 MIR8064-201ENST00000612863 90 ntBASIC-0.43□□□□□ -2.48
NEK3P51956 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.44□□□□□ -2.48
NEK3P51956 Z95118.1-201ENST00000421372 247 ntBASIC-0.44□□□□□ -2.48
NEK3P51956 FGF7P7-201ENST00000514120 227 ntBASIC-0.44□□□□□ -2.48
NEK3P51956 MIR6507-201ENST00000613630 70 ntBASIC-0.44□□□□□ -2.48
NEK3P51956 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
NEK3P51956 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
NEK3P51956 RNU6-158P-201ENST00000517104 100 ntBASIC-0.45□□□□□ -2.48
NEK3P51956 AP001180.6-201ENST00000584918 159 ntBASIC-0.45□□□□□ -2.48
NEK3P51956 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
NEK3P51956 RNU6-54P-201ENST00000365563 107 ntBASIC-0.46□□□□□ -2.48
NEK3P51956 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
NEK3P51956 AC244250.2-201ENST00000418731 148 ntBASIC-0.46□□□□□ -2.48
NEK3P51956 SNORD114-28-201ENST00000363610 72 ntBASIC-0.47□□□□□ -2.48
NEK3P51956 MIR1265-201ENST00000408444 86 ntBASIC-0.47□□□□□ -2.48
NEK3P51956 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
NEK3P51956 MIR4788-201ENST00000639104 80 ntBASIC-0.47□□□□□ -2.48
NEK3P51956 MTATP6P29-201ENST00000415057 132 ntBASIC-0.48□□□□□ -2.49
NEK3P51956 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.49□□□□□ -2.49
NEK3P51956 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.49□□□□□ -2.49
NEK3P51956 SNORA19-201ENST00000384737 128 ntBASIC-0.49□□□□□ -2.49
NEK3P51956 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.49□□□□□ -2.49
NEK3P51956 RNU7-61P-201ENST00000515897 61 ntBASIC-0.49□□□□□ -2.49
NEK3P51956 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.5□□□□□ -2.49
NEK3P51956 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.5□□□□□ -2.49
NEK3P51956 RNU6-719P-201ENST00000516671 104 ntBASIC-0.5□□□□□ -2.49
NEK3P51956 MIR2052-201ENST00000636055 55 ntBASIC-0.5□□□□□ -2.49
NEK3P51956 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
NEK3P51956 RNU6-758P-201ENST00000516292 89 ntBASIC-0.51□□□□□ -2.49
NEK3P51956 MIR4493-201ENST00000584016 73 ntBASIC-0.51□□□□□ -2.49
NEK3P51956 MIR6086-201ENST00000638065 55 ntBASIC-0.51□□□□□ -2.49
NEK3P51956 AL031737.1-201ENST00000450125 223 ntBASIC-0.52□□□□□ -2.49
NEK3P51956 RNU7-24P-201ENST00000458867 62 ntBASIC-0.52□□□□□ -2.49
NEK3P51956 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
NEK3P51956 SNORA18.5-201ENST00000516616 101 ntBASIC-0.52□□□□□ -2.49
NEK3P51956 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
NEK3P51956 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
NEK3P51956 SNORA24B-201ENST00000384176 131 ntBASIC-0.53□□□□□ -2.49
NEK3P51956 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
NEK3P51956 MIR101-1-201ENST00000362265 75 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 RNU6-495P-201ENST00000362995 107 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 MIR604-201ENST00000384880 94 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 RNA5SP292-201ENST00000390974 118 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 MIR4432-201ENST00000581823 84 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 MIR4436A-201ENST00000585278 85 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 AL391099.1-201ENST00000624635 187 ntBASIC-0.54□□□□□ -2.5
NEK3P51956 AL606753.1-201ENST00000427435 87 ntBASIC-0.55□□□□□ -2.5
NEK3P51956 RNU6-109P-201ENST00000516364 107 ntBASIC-0.55□□□□□ -2.5
NEK3P51956 RNU6-184P-201ENST00000516514 107 ntBASIC-0.55□□□□□ -2.5
NEK3P51956 RNU5F-1-201ENST00000362507 117 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RNA5SP25-201ENST00000410815 110 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RPS29P8-201ENST00000445109 171 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 SNORD42B-201ENST00000458893 67 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RNU6-406P-201ENST00000516470 107 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RNA5SP476-201ENST00000516613 103 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RNU6-762P-201ENST00000517107 102 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 MIR3140-201ENST00000583685 90 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 U7.3-201ENST00000616123 62 ntBASIC-0.56□□□□□ -2.5
NEK3P51956 RNU4-32P-201ENST00000363404 141 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 RNU6-455P-201ENST00000384681 107 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
NEK3P51956 MIR1236-201ENST00000408340 102 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 SNORD75.2-201ENST00000408784 58 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 RNA5SP169-201ENST00000517268 117 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 AC026421.1-201ENST00000519101 163 ntBASIC-0.57□□□□□ -2.5
NEK3P51956 SNORD115-25-201ENST00000362619 82 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 RNU6-900P-201ENST00000384498 102 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 RNA5SP451-201ENST00000410588 110 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 MTATP8P2-201ENST00000435212 202 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 SNORA40.17-201ENST00000517256 115 ntBASIC-0.58□□□□□ -2.5
NEK3P51956 RNU6-755P-201ENST00000364400 103 ntBASIC-0.59□□□□□ -2.5
NEK3P51956 RNY4P18-201ENST00000391107 89 ntBASIC-0.59□□□□□ -2.5
NEK3P51956 MIR548E-201ENST00000408287 88 ntBASIC-0.59□□□□□ -2.5
NEK3P51956 SNORD75.1-201ENST00000408373 60 ntBASIC-0.59□□□□□ -2.5
NEK3P51956 AC006254.2-201ENST00000603259 279 ntBASIC-0.59□□□□□ -2.5
NEK3P51956 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.6□□□□□ -2.51
NEK3P51956 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.61□□□□□ -2.51
NEK3P51956 AP000676.1-201ENST00000533307 52 ntBASIC-0.61□□□□□ -2.51
NEK3P51956 RNA5SP368-201ENST00000364298 116 ntBASIC-0.62□□□□□ -2.51
NEK3P51956 SNORA49-201ENST00000386157 136 ntBASIC-0.62□□□□□ -2.51
NEK3P51956 AC108676.2-201ENST00000605225 163 ntBASIC-0.62□□□□□ -2.51
NEK3P51956 MIR9-2-201ENST00000384838 87 ntBASIC-0.63□□□□□ -2.51
NEK3P51956 RNU4-61P-201ENST00000411243 107 ntBASIC-0.63□□□□□ -2.51
NEK3P51956 AC097510.1-201ENST00000510945 133 ntBASIC-0.63□□□□□ -2.51
NEK3P51956 RNA5SP66-201ENST00000517178 101 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms