Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNU6-65P-201ENST00000516332 98 ntBASIC-1.27□□□□□ -2.61
SMARCA4P51532 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.27□□□□□ -2.61
SMARCA4P51532 U6.96-201ENST00000636425 70 ntBASIC-1.27□□□□□ -2.61
SMARCA4P51532 RNY4P9-201ENST00000363194 97 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 RNU6-841P-201ENST00000383872 107 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 RNU6-635P-201ENST00000516651 102 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.28□□□□□ -2.61
SMARCA4P51532 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 FGF7P7-201ENST00000514120 227 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 SNORD115-23-201ENST00000364461 82 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 RNU6-592P-201ENST00000411333 103 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 SNORD127-201ENST00000458892 86 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 MIR3121-201ENST00000579680 77 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 AL442128.1-201ENST00000615151 90 ntBASIC-1.29□□□□□ -2.62
SMARCA4P51532 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.3□□□□□ -2.62
SMARCA4P51532 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.3□□□□□ -2.62
SMARCA4P51532 AC090616.4-201ENST00000448026 115 ntBASIC-1.3□□□□□ -2.62
SMARCA4P51532 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.3□□□□□ -2.62
SMARCA4P51532 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.3□□□□□ -2.62
SMARCA4P51532 MTND4P29-201ENST00000503122 1372 ntBASIC-1.31□□□□□ -2.62
SMARCA4P51532 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.31□□□□□ -2.62
SMARCA4P51532 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.31□□□□□ -2.62
SMARCA4P51532 MIR3171-201ENST00000584270 74 ntBASIC-1.31□□□□□ -2.62
SMARCA4P51532 MIR8062-201ENST00000621515 85 ntBASIC-1.31□□□□□ -2.62
SMARCA4P51532 RNU6-495P-201ENST00000362995 107 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
SMARCA4P51532 MIR548P-201ENST00000408336 84 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 MIR548H3-201ENST00000408771 118 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.32□□□□□ -2.62
SMARCA4P51532 RNU6-803P-201ENST00000516034 102 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 MIR4490-201ENST00000582647 84 ntBASIC-1.32□□□□□ -2.62
SMARCA4P51532 RNU6-230P-201ENST00000362457 104 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 RNU6-924P-201ENST00000362926 108 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 SNORA63.6-201ENST00000364921 119 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 RNU6-75P-201ENST00000515944 104 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 RNU6-647P-201ENST00000364243 107 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 MIR1263-201ENST00000408324 86 ntBASIC-1.33□□□□□ -2.62
SMARCA4P51532 SNORD115-22-201ENST00000364456 82 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 AL160413.1-201ENST00000622780 310 ntBASIC-1.34□□□□□ -2.62
SMARCA4P51532 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.35□□□□□ -2.63
SMARCA4P51532 RNA5SP136-201ENST00000410906 107 ntBASIC-1.35□□□□□ -2.63
SMARCA4P51532 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.36□□□□□ -2.63
SMARCA4P51532 SNORA33.2-201ENST00000365413 134 ntBASIC-1.36□□□□□ -2.63
SMARCA4P51532 RNU6-239P-201ENST00000390990 99 ntBASIC-1.36□□□□□ -2.63
SMARCA4P51532 MIR3123-201ENST00000583417 75 ntBASIC-1.36□□□□□ -2.63
SMARCA4P51532 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 RNU6-80P-201ENST00000384195 107 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 RNU6-918P-201ENST00000391219 106 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 SNORD50.2-201ENST00000365465 70 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 MIR548D2-201ENST00000384955 97 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.37□□□□□ -2.63
SMARCA4P51532 SNORA63.2-201ENST00000362603 126 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 MTND2P23-201ENST00000422990 651 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 AL353691.2-201ENST00000443795 59 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 CYP3A54P-201ENST00000566950 75 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 MIR3140-201ENST00000583685 90 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 MIR6888-201ENST00000621977 67 ntBASIC-1.38□□□□□ -2.63
SMARCA4P51532 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 RNU6-639P-201ENST00000384074 107 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 RNU6-260P-201ENST00000384092 107 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 AL035461.1-201ENST00000421490 332 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 AP002795.1-201ENST00000534879 84 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 MIR548S-201ENST00000581352 82 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 AC025521.1-201ENST00000621624 286 ntBASIC-1.39□□□□□ -2.63
SMARCA4P51532 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.39□□□□□ -2.63
SMARCA4P51532 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 RNU6-990P-201ENST00000364385 104 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 FTX_4.1-201ENST00000616291 147 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 RNU6-987P-201ENST00000384759 104 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 MIR548U-201ENST00000390728 81 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.4□□□□□ -2.63
SMARCA4P51532 RPL35AP4-201ENST00000412007 102 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms