Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SLC6A11P48066 RNU6-330P-201ENST00000363015 107 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 RNU6-411P-201ENST00000384451 107 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 NAMPTP3-201ENST00000569273 224 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SLC6A11P48066 AL162376.1-201ENST00000624117 175 ntBASIC0.86□□□□□ -2.27
SLC6A11P48066 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SLC6A11P48066 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 AC073261.1-201ENST00000429409 121 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 RNU6-523P-201ENST00000516304 54 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 RNU6-70P-201ENST00000516438 60 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 SNORA25.18-201ENST00000607153 114 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 MIR664A-201ENST00000626086 82 ntBASIC0.85□□□□□ -2.27
SLC6A11P48066 MT-TY-201ENST00000387409 66 ntBASIC0.84□□□□□ -2.27
SLC6A11P48066 SNORD75.2-201ENST00000408784 58 ntBASIC0.84□□□□□ -2.27
SLC6A11P48066 RNU7-24P-201ENST00000458867 62 ntBASIC0.84□□□□□ -2.27
SLC6A11P48066 RNU5B-6P-201ENST00000516765 68 ntBASIC0.84□□□□□ -2.27
SLC6A11P48066 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.84□□□□□ -2.27
SLC6A11P48066 AC006210.1-201ENST00000424882 111 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 AL691482.2-201ENST00000457453 84 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 RNU6-752P-201ENST00000516376 102 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 MIR4752-201ENST00000579672 72 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
SLC6A11P48066 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SLC6A11P48066 RNU6-495P-201ENST00000362995 107 ntBASIC0.82□□□□□ -2.28
SLC6A11P48066 AC073869.9-201ENST00000641610 120 ntBASIC0.82□□□□□ -2.28
SLC6A11P48066 Y_RNA.30-201ENST00000362572 97 ntBASIC0.81□□□□□ -2.28
SLC6A11P48066 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SLC6A11P48066 RNU6-1015P-201ENST00000517121 99 ntBASIC0.81□□□□□ -2.28
SLC6A11P48066 MIR3675-201ENST00000583661 73 ntBASIC0.81□□□□□ -2.28
SLC6A11P48066 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 RNU6-587P-201ENST00000391282 106 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 SNORD110-201ENST00000408189 75 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 SNORD71-201ENST00000411292 86 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 RNU6-687P-201ENST00000516443 89 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 AC069503.3-201ENST00000618674 145 ntBASIC0.8□□□□□ -2.28
SLC6A11P48066 MIR4473-201ENST00000583731 91 ntBASIC0.79□□□□□ -2.28
SLC6A11P48066 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
SLC6A11P48066 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SLC6A11P48066 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 RNU6-1241P-201ENST00000384536 107 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 MIR203A-201ENST00000384836 110 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 AC069271.1-201ENST00000445577 156 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 SNORD42B-201ENST00000458893 67 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 RNU6-871P-201ENST00000516122 100 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 SNORA70.25-201ENST00000612741 95 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 MIR6509-201ENST00000614603 85 ntBASIC0.78□□□□□ -2.28
SLC6A11P48066 RNA5SP457-201ENST00000363657 124 ntBASIC0.77□□□□□ -2.29
SLC6A11P48066 RNU6-634P-201ENST00000459134 106 ntBASIC0.77□□□□□ -2.29
SLC6A11P48066 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
SLC6A11P48066 SNORD114-23-201ENST00000363536 72 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 RNU6-1039P-201ENST00000383931 107 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 MIR154-201ENST00000385243 84 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.76□□□□□ -2.29
SLC6A11P48066 SNORD118-201ENST00000363593 134 ntBASIC0.75□□□□□ -2.29
SLC6A11P48066 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
SLC6A11P48066 SNORD45.1-201ENST00000363181 77 ntBASIC0.74□□□□□ -2.29
SLC6A11P48066 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
SLC6A11P48066 AC010487.4-201ENST00000637027 61 ntBASIC0.74□□□□□ -2.29
SLC6A11P48066 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
SLC6A11P48066 Y_RNA.115-201ENST00000363272 98 ntBASIC0.73□□□□□ -2.29
SLC6A11P48066 Y_RNA.423-201ENST00000384057 113 ntBASIC0.73□□□□□ -2.29
SLC6A11P48066 AC114801.3-201ENST00000510231 177 ntBASIC0.73□□□□□ -2.29
SLC6A11P48066 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
SLC6A11P48066 Y_RNA.407-201ENST00000383986 113 ntBASIC0.72□□□□□ -2.29
SLC6A11P48066 MIR518A1-201ENST00000385068 85 ntBASIC0.72□□□□□ -2.29
SLC6A11P48066 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
SLC6A11P48066 RNU6-604P-201ENST00000390917 100 ntBASIC0.72□□□□□ -2.29
SLC6A11P48066 MIR8053-201ENST00000613344 75 ntBASIC0.72□□□□□ -2.29
SLC6A11P48066 SNORD114-4-201ENST00000363962 75 ntBASIC0.71□□□□□ -2.3
SLC6A11P48066 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
SLC6A11P48066 AC139453.2-201ENST00000487255 133 ntBASIC0.71□□□□□ -2.3
SLC6A11P48066 MIR548AE1-201ENST00000583292 70 ntBASIC0.71□□□□□ -2.3
SLC6A11P48066 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SLC6A11P48066 Y_RNA.178-201ENST00000363832 102 ntBASIC0.7□□□□□ -2.3
SLC6A11P48066 RNU6-990P-201ENST00000364385 104 ntBASIC0.7□□□□□ -2.3
SLC6A11P48066 SNORD115-31-201ENST00000365318 82 ntBASIC0.7□□□□□ -2.3
SLC6A11P48066 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
SLC6A11P48066 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
SLC6A11P48066 SNORD115-22-201ENST00000364456 82 ntBASIC0.69□□□□□ -2.3
SLC6A11P48066 RNA5SP147-201ENST00000516493 109 ntBASIC0.69□□□□□ -2.3
SLC6A11P48066 MIR3657-201ENST00000584818 117 ntBASIC0.69□□□□□ -2.3
SLC6A11P48066 RNU1-29P-201ENST00000606574 126 ntBASIC0.69□□□□□ -2.3
SLC6A11P48066 SNORA2A-201ENST00000383885 135 ntBASIC0.68□□□□□ -2.3
SLC6A11P48066 RNU6-260P-201ENST00000384092 107 ntBASIC0.68□□□□□ -2.3
SLC6A11P48066 SNORD45A-201ENST00000384512 84 ntBASIC0.68□□□□□ -2.3
SLC6A11P48066 RNU6-540P-201ENST00000384622 101 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms