Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-106P-201ENST00000384405 107 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 MIR604-201ENST00000384880 94 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
NEDD4P46934 FGF7P7-201ENST00000514120 227 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 RNU6-589P-201ENST00000516485 107 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 RNU6-537P-201ENST00000517277 103 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 MIR6129-201ENST00000616087 109 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 SNORD116-10-201ENST00000363791 102 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 AL603908.1-201ENST00000406098 201 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNY4P3-201ENST00000365254 95 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 SNORD113-1-201ENST00000365321 69 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 MIR590-201ENST00000385008 97 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNU6-554P-201ENST00000410466 106 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNU6-54P-201ENST00000365563 107 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC244250.2-201ENST00000418731 148 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 RNU6-719P-201ENST00000516671 104 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC108676.2-201ENST00000605225 163 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU2-51P-201ENST00000410708 197 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 RNU6-766P-201ENST00000362478 107 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNA5SP451-201ENST00000410588 110 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 MTATP6P29-201ENST00000415057 132 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 SNORA18.5-201ENST00000516616 101 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-789P-201ENST00000517105 102 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 SNORA19-201ENST00000384737 128 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-495P-201ENST00000362995 107 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU6-30P-201ENST00000384561 107 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU7-61P-201ENST00000515897 61 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU6-762P-201ENST00000517107 102 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 MIR3140-201ENST00000583685 90 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 SNORD114-15-201ENST00000364687 72 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-455P-201ENST00000384681 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNA5SP292-201ENST00000390974 118 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 SNORD42B-201ENST00000458893 67 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-109P-201ENST00000516364 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-184P-201ENST00000516514 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-158P-201ENST00000517104 100 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 AC026421.1-201ENST00000519101 163 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 MIR2052-201ENST00000636055 55 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 SNORA24B-201ENST00000384176 131 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RNU6-900P-201ENST00000384498 102 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 MIR224-201ENST00000384889 81 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RNU7-24P-201ENST00000458867 62 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 SNORD115-25-201ENST00000362619 82 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD114-11-201ENST00000363738 75 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD95.1-201ENST00000364099 68 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AL606753.1-201ENST00000427435 87 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AL031737.1-201ENST00000450125 223 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AP000676.1-201ENST00000533307 52 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 MIR548AZ-201ENST00000616567 95 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 RNU4-32P-201ENST00000363404 141 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 MIR1236-201ENST00000408340 102 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 snoU13.19-201ENST00000459148 104 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 AL590491.3-201ENST00000610731 82 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 U7.3-201ENST00000616123 62 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 MIR9-2-201ENST00000384838 87 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 MIR548E-201ENST00000408287 88 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 SNORD75.2-201ENST00000408784 58 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
NEDD4P46934 RNU5F-1-201ENST00000362507 117 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 MIR582-201ENST00000365731 98 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORA49-201ENST00000386157 136 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 MTATP8P2-201ENST00000435212 202 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORA40.17-201ENST00000517256 115 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 AC006254.2-201ENST00000603259 279 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 RNY4P18-201ENST00000391107 89 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 RNU4-63P-201ENST00000411313 118 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 AC097510.1-201ENST00000510945 133 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
NEDD4P46934 RNU7-55P-201ENST00000459426 62 ntBASIC-0.47□□□□□ -2.48
NEDD4P46934 RNU6-162P-201ENST00000516228 103 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms