Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-106P-201ENST00000384405 107 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 MIR604-201ENST00000384880 94 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
NEDD4P46934 FGF7P7-201ENST00000514120 227 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 RNU6-589P-201ENST00000516485 107 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 RNU6-537P-201ENST00000517277 103 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 MIR6129-201ENST00000616087 109 ntBASIC-0.32□□□□□ -2.46
NEDD4P46934 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 SNORD116-10-201ENST00000363791 102 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 AL603908.1-201ENST00000406098 201 ntBASIC-0.33□□□□□ -2.46
NEDD4P46934 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNY4P3-201ENST00000365254 95 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 SNORD113-1-201ENST00000365321 69 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 MIR590-201ENST00000385008 97 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNU6-554P-201ENST00000410466 106 ntBASIC-0.34□□□□□ -2.46
NEDD4P46934 RNU6-54P-201ENST00000365563 107 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC244250.2-201ENST00000418731 148 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 RNU6-719P-201ENST00000516671 104 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 AC108676.2-201ENST00000605225 163 ntBASIC-0.35□□□□□ -2.46
NEDD4P46934 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 RNU2-51P-201ENST00000410708 197 ntBASIC-0.36□□□□□ -2.47
NEDD4P46934 SNORA32.3-201ENST00000384772 121 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.37□□□□□ -2.47
NEDD4P46934 RNU6-766P-201ENST00000362478 107 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNA5SP451-201ENST00000410588 110 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 MTATP6P29-201ENST00000415057 132 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 SNORA18.5-201ENST00000516616 101 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-789P-201ENST00000517105 102 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 SNORA19-201ENST00000384737 128 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
NEDD4P46934 RNU6-495P-201ENST00000362995 107 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU6-30P-201ENST00000384561 107 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU7-61P-201ENST00000515897 61 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 RNU6-762P-201ENST00000517107 102 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 MIR3140-201ENST00000583685 90 ntBASIC-0.39□□□□□ -2.47
NEDD4P46934 SNORD114-15-201ENST00000364687 72 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-455P-201ENST00000384681 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNA5SP292-201ENST00000390974 118 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 SNORD42B-201ENST00000458893 67 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-109P-201ENST00000516364 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-184P-201ENST00000516514 107 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 RNU6-158P-201ENST00000517104 100 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 AC026421.1-201ENST00000519101 163 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 MIR2052-201ENST00000636055 55 ntBASIC-0.4□□□□□ -2.47
NEDD4P46934 SNORA24B-201ENST00000384176 131 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RNU6-900P-201ENST00000384498 102 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 MIR224-201ENST00000384889 81 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 RNU7-24P-201ENST00000458867 62 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
NEDD4P46934 SNORD115-25-201ENST00000362619 82 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD114-11-201ENST00000363738 75 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD95.1-201ENST00000364099 68 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AL606753.1-201ENST00000427435 87 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AL031737.1-201ENST00000450125 223 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 AP000676.1-201ENST00000533307 52 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 MIR548AZ-201ENST00000616567 95 ntBASIC-0.42□□□□□ -2.48
NEDD4P46934 RNU4-32P-201ENST00000363404 141 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 MIR1236-201ENST00000408340 102 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 snoU13.19-201ENST00000459148 104 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 AL590491.3-201ENST00000610731 82 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 U7.3-201ENST00000616123 62 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
NEDD4P46934 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 MIR9-2-201ENST00000384838 87 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 MIR548E-201ENST00000408287 88 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 SNORD75.2-201ENST00000408784 58 ntBASIC-0.44□□□□□ -2.48
NEDD4P46934 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
NEDD4P46934 RNU5F-1-201ENST00000362507 117 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 MIR582-201ENST00000365731 98 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORA49-201ENST00000386157 136 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 MTATP8P2-201ENST00000435212 202 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 SNORA40.17-201ENST00000517256 115 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 AC006254.2-201ENST00000603259 279 ntBASIC-0.45□□□□□ -2.48
NEDD4P46934 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 RNY4P18-201ENST00000391107 89 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 RNU4-63P-201ENST00000411313 118 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 AC097510.1-201ENST00000510945 133 ntBASIC-0.46□□□□□ -2.48
NEDD4P46934 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
NEDD4P46934 RNU7-55P-201ENST00000459426 62 ntBASIC-0.47□□□□□ -2.48
NEDD4P46934 RNU6-162P-201ENST00000516228 103 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms