Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNA5SP98-201ENST00000363158 137 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU6-46P-201ENST00000383860 107 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU6-972P-201ENST00000391208 107 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 U3.27-201ENST00000391237 200 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU2-51P-201ENST00000410708 197 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.3□□□□□ -2.46
RPA1P27694 AC244090.1-201ENST00000441884 93 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU6-313P-201ENST00000516317 112 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 RNU6-62P-201ENST00000516526 102 ntBASIC-0.3□□□□□ -2.46
RPA1P27694 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
RPA1P27694 SNORA63.4-201ENST00000362763 126 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 RNU6-824P-201ENST00000363724 104 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 SNORD114-11-201ENST00000363738 75 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 AL603908.1-201ENST00000406098 201 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.31□□□□□ -2.46
RPA1P27694 RNU6-766P-201ENST00000362478 107 ntBASIC-0.32□□□□□ -2.46
RPA1P27694 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.32□□□□□ -2.46
RPA1P27694 snoU13.13-201ENST00000458842 104 ntBASIC-0.32□□□□□ -2.46
RPA1P27694 RNU6-382P-201ENST00000365181 106 ntBASIC-0.33□□□□□ -2.46
RPA1P27694 SNORD56B-201ENST00000384713 71 ntBASIC-0.33□□□□□ -2.46
RPA1P27694 MIR548U-201ENST00000390728 81 ntBASIC-0.33□□□□□ -2.46
RPA1P27694 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 MIR329-2-201ENST00000385029 84 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 RNA5SP300-201ENST00000391197 107 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 MTATP8P2-201ENST00000435212 202 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 AC090617.8-201ENST00000623339 167 ntBASIC-0.34□□□□□ -2.46
RPA1P27694 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
RPA1P27694 RNU6-834P-201ENST00000362367 110 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 SNORD114-31-201ENST00000363219 75 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 SNORD20-201ENST00000384550 80 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 MIR216B-201ENST00000390186 82 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
RPA1P27694 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 RNA5SP169-201ENST00000517268 117 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 uc_338.36-201ENST00000622331 158 ntBASIC-0.35□□□□□ -2.47
RPA1P27694 RNU6-502P-201ENST00000362419 108 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 SNORD115-25-201ENST00000362619 82 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 SNORD116-10-201ENST00000363791 102 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
RPA1P27694 RNU6-337P-201ENST00000391243 106 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 RNA5SP285-201ENST00000516619 119 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.36□□□□□ -2.47
RPA1P27694 MIR488-201ENST00000365739 83 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 MIR203A-201ENST00000384836 110 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 MIR4796-201ENST00000580742 81 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 MIR4280-201ENST00000582178 76 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 MIR4788-201ENST00000639104 80 ntBASIC-0.37□□□□□ -2.47
RPA1P27694 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 SNORD75.2-201ENST00000408784 58 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 AL445193.1-201ENST00000441183 141 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 RNU6-267P-201ENST00000516714 103 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 IGLVI-20-201ENST00000519296 130 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 MIR5704-201ENST00000584029 77 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 AP001318.4-201ENST00000616637 121 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 MIR8068-201ENST00000618032 68 ntBASIC-0.38□□□□□ -2.47
RPA1P27694 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 RNU6-215P-201ENST00000365169 102 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 AL031737.1-201ENST00000450125 223 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 RNU7-55P-201ENST00000459426 62 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 RNU6-406P-201ENST00000516470 107 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 U2.22-201ENST00000636441 106 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 MIR6759-201ENST00000638110 65 ntBASIC-0.39□□□□□ -2.47
RPA1P27694 RNU6-640P-201ENST00000363693 105 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 RNU6-147P-201ENST00000383983 107 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 RNU6-900P-201ENST00000384498 102 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 RNA5SP147-201ENST00000516493 109 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 MIR4773-1-201ENST00000637203 78 ntBASIC-0.4□□□□□ -2.47
RPA1P27694 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 RNU6-905P-201ENST00000384434 107 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 RNY1P7-201ENST00000384743 110 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 RNU7-24P-201ENST00000458867 62 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 MIR6773-201ENST00000612812 74 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.41□□□□□ -2.48
RPA1P27694 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 RNU6-755P-201ENST00000364400 103 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 RNU6-44P-201ENST00000384045 107 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 MTATP6P29-201ENST00000415057 132 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 SNORD38.3-201ENST00000516599 73 ntBASIC-0.42□□□□□ -2.48
RPA1P27694 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 RNU4-61P-201ENST00000411243 107 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 RNU6-158P-201ENST00000517104 100 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 MIR4645-201ENST00000583158 77 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 MALAT1.1-201ENST00000618249 95 ntBASIC-0.43□□□□□ -2.48
RPA1P27694 RNU6-219P-201ENST00000364728 107 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms