Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SNORA33.1-201ENST00000364957 130 ntBASIC1.83□□□□□ -2.12
SMPD1P17405 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.83□□□□□ -2.12
SMPD1P17405 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
SMPD1P17405 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SMPD1P17405 MIR758-201ENST00000390227 88 ntBASIC1.82□□□□□ -2.12
SMPD1P17405 RNA5SP220-201ENST00000516298 104 ntBASIC1.82□□□□□ -2.12
SMPD1P17405 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.82□□□□□ -2.12
SMPD1P17405 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
SMPD1P17405 Y_RNA.327-201ENST00000365201 102 ntBASIC1.81□□□□□ -2.12
SMPD1P17405 MIR4452-201ENST00000583004 71 ntBASIC1.81□□□□□ -2.12
SMPD1P17405 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SMPD1P17405 Y_RNA.325-201ENST00000365171 122 ntBASIC1.8□□□□□ -2.12
SMPD1P17405 SNORA8.2-201ENST00000384372 139 ntBASIC1.8□□□□□ -2.12
SMPD1P17405 RNU1-78P-201ENST00000391248 165 ntBASIC1.8□□□□□ -2.12
SMPD1P17405 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
SMPD1P17405 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMPD1P17405 SNORA63.6-201ENST00000364921 119 ntBASIC1.79□□□□□ -2.12
SMPD1P17405 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.79□□□□□ -2.12
SMPD1P17405 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
SMPD1P17405 RNU6-269P-201ENST00000391077 97 ntBASIC1.78□□□□□ -2.12
SMPD1P17405 RNA5SP47-201ENST00000517230 109 ntBASIC1.78□□□□□ -2.12
SMPD1P17405 SNORA25.8-201ENST00000364831 128 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 Y_RNA.374-201ENST00000365606 101 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 RNU6-716P-201ENST00000365621 103 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 SNORD116.2-201ENST00000391251 93 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.77□□□□□ -2.13
SMPD1P17405 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 SCARNA17.3-201ENST00000516381 125 ntBASIC1.77□□□□□ -2.13
SMPD1P17405 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMPD1P17405 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
SMPD1P17405 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 SNORA67.6-201ENST00000391093 99 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 MIR548F3-201ENST00000408509 87 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 RNA5SP484-201ENST00000458857 111 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
SMPD1P17405 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.75□□□□□ -2.13
SMPD1P17405 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
SMPD1P17405 MIR548X-201ENST00000580069 75 ntBASIC1.75□□□□□ -2.13
SMPD1P17405 SNORA9.1-201ENST00000362412 131 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 Y_RNA.407-201ENST00000383986 113 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 SNORD116-16-201ENST00000384533 92 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 SNORD12-201ENST00000391002 90 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 SNORA70.22-201ENST00000517160 124 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 SNORA40.16-201ENST00000517238 121 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 MIR7110-201ENST00000612638 86 ntBASIC1.74□□□□□ -2.13
SMPD1P17405 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
SMPD1P17405 MIR652-201ENST00000385278 98 ntBASIC1.73□□□□□ -2.13
SMPD1P17405 RNU6-1246P-201ENST00000391064 107 ntBASIC1.73□□□□□ -2.13
SMPD1P17405 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
SMPD1P17405 Y_RNA.74-201ENST00000362911 99 ntBASIC1.72□□□□□ -2.13
SMPD1P17405 AL021921.1-201ENST00000442774 93 ntBASIC1.72□□□□□ -2.13
SMPD1P17405 RNA5SP102-201ENST00000516865 106 ntBASIC1.72□□□□□ -2.13
SMPD1P17405 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
SMPD1P17405 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMPD1P17405 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
SMPD1P17405 CYP3A54P-201ENST00000566950 75 ntBASIC1.71□□□□□ -2.14
SMPD1P17405 SCARNA16.5-201ENST00000517114 183 ntBASIC1.7□□□□□ -2.14
SMPD1P17405 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
SMPD1P17405 AL162376.1-201ENST00000624117 175 ntBASIC1.7□□□□□ -2.14
SMPD1P17405 SNORD114-22-201ENST00000365423 72 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 MIR582-201ENST00000365731 98 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SMPD1P17405 MIR548E-201ENST00000408287 88 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 RNU6-1110P-201ENST00000516462 101 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 MIR3678-201ENST00000578455 94 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 MIR6515-201ENST00000619843 57 ntBASIC1.69□□□□□ -2.14
SMPD1P17405 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMPD1P17405 SNORA40B-201ENST00000385573 128 ntBASIC1.68□□□□□ -2.14
SMPD1P17405 SNORD105-201ENST00000386910 85 ntBASIC1.68□□□□□ -2.14
SMPD1P17405 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
SMPD1P17405 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
SMPD1P17405 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
SMPD1P17405 U6.96-201ENST00000636425 70 ntBASIC1.67□□□□□ -2.14
SMPD1P17405 RNU6-838P-201ENST00000363399 108 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 MIR527-201ENST00000385244 85 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 AC002429.1-201ENST00000437672 148 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 U7.7-201ENST00000459276 60 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 RNU6-518P-201ENST00000516056 96 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 AC022709.1-201ENST00000615967 87 ntBASIC1.66□□□□□ -2.14
SMPD1P17405 Y_RNA.282-201ENST00000364793 102 ntBASIC1.65□□□□□ -2.15
SMPD1P17405 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
SMPD1P17405 MIR548AE1-201ENST00000583292 70 ntBASIC1.65□□□□□ -2.15
SMPD1P17405 PVT1_3.1-201ENST00000620853 95 ntBASIC1.65□□□□□ -2.15
SMPD1P17405 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
SMPD1P17405 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SMPD1P17405 RNU6-810P-201ENST00000364001 107 ntBASIC1.63□□□□□ -2.15
SMPD1P17405 MIR222-201ENST00000384992 110 ntBASIC1.63□□□□□ -2.15
SMPD1P17405 MIR545-201ENST00000385085 106 ntBASIC1.63□□□□□ -2.15
SMPD1P17405 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
SMPD1P17405 MIR6828-201ENST00000636181 60 ntBASIC1.63□□□□□ -2.15
SMPD1P17405 MIR516B1-201ENST00000385211 90 ntBASIC1.62□□□□□ -2.15
SMPD1P17405 AC006210.1-201ENST00000424882 111 ntBASIC1.62□□□□□ -2.15
SMPD1P17405 FABP5P4-201ENST00000437203 171 ntBASIC1.62□□□□□ -2.15
SMPD1P17405 MIR4473-201ENST00000583731 91 ntBASIC1.62□□□□□ -2.15
SMPD1P17405 AL353770.2-201ENST00000620024 78 ntBASIC1.62□□□□□ -2.15
SMPD1P17405 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms