Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC104996.3-201ENST00000590718 94 ntBASIC-0.96□□□□□ -2.56
CD28P10747 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.96□□□□□ -2.56
CD28P10747 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.97□□□□□ -2.56
CD28P10747 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.97□□□□□ -2.56
CD28P10747 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
CD28P10747 SNORD75.2-201ENST00000408784 58 ntBASIC-0.97□□□□□ -2.56
CD28P10747 MTND4LP9-201ENST00000427694 174 ntBASIC-0.97□□□□□ -2.56
CD28P10747 SNORD4B-201ENST00000459083 72 ntBASIC-0.97□□□□□ -2.56
CD28P10747 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.97□□□□□ -2.56
CD28P10747 RNU6-62P-201ENST00000516526 102 ntBASIC-0.97□□□□□ -2.56
CD28P10747 AC068339.1-201ENST00000526965 141 ntBASIC-0.97□□□□□ -2.56
CD28P10747 MIR3140-201ENST00000583685 90 ntBASIC-0.97□□□□□ -2.56
CD28P10747 AL353621.2-201ENST00000605340 133 ntBASIC-0.97□□□□□ -2.56
CD28P10747 SNORD45B-201ENST00000364617 72 ntBASIC-0.98□□□□□ -2.57
CD28P10747 RNU6-813P-201ENST00000384691 107 ntBASIC-0.98□□□□□ -2.57
CD28P10747 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
CD28P10747 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.98□□□□□ -2.57
CD28P10747 RNU6-426P-201ENST00000516464 97 ntBASIC-0.98□□□□□ -2.57
CD28P10747 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.98□□□□□ -2.57
CD28P10747 snoR1.1-201ENST00000628177 80 ntBASIC-0.98□□□□□ -2.57
CD28P10747 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.99□□□□□ -2.57
CD28P10747 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.99□□□□□ -2.57
CD28P10747 AP000533.3-201ENST00000447704 118 ntBASIC-0.99□□□□□ -2.57
CD28P10747 MTND5P41-201ENST00000517498 206 ntBASIC-0.99□□□□□ -2.57
CD28P10747 YWHAEP3-201ENST00000582767 121 ntBASIC-0.99□□□□□ -2.57
CD28P10747 AL157777.2-201ENST00000258070 137 ntBASIC-1□□□□□ -2.57
CD28P10747 Y_RNA.257-201ENST00000364596 102 ntBASIC-1□□□□□ -2.57
CD28P10747 Y_RNA.491-201ENST00000384417 107 ntBASIC-1□□□□□ -2.57
CD28P10747 RNU6-905P-201ENST00000384434 107 ntBASIC-1□□□□□ -2.57
CD28P10747 MIR517B-201ENST00000385102 67 ntBASIC-1□□□□□ -2.57
CD28P10747 Y_RNA.583-201ENST00000391033 113 ntBASIC-1□□□□□ -2.57
CD28P10747 RNA5SP272-201ENST00000516095 111 ntBASIC-1□□□□□ -2.57
CD28P10747 RNU6-990P-201ENST00000364385 104 ntBASIC-1.01□□□□□ -2.57
CD28P10747 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.01□□□□□ -2.57
CD28P10747 SNORA62.4-201ENST00000365504 151 ntBASIC-1.01□□□□□ -2.57
CD28P10747 RNU6-886P-201ENST00000384319 105 ntBASIC-1.01□□□□□ -2.57
CD28P10747 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.01□□□□□ -2.57
CD28P10747 RNU6-182P-201ENST00000516970 105 ntBASIC-1.01□□□□□ -2.57
CD28P10747 MIR5009-201ENST00000578736 100 ntBASIC-1.01□□□□□ -2.57
CD28P10747 AC103810.7-201ENST00000607821 91 ntBASIC-1.01□□□□□ -2.57
CD28P10747 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.01□□□□□ -2.57
CD28P10747 SNORD114-25-201ENST00000363742 72 ntBASIC-1.02□□□□□ -2.57
CD28P10747 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.02□□□□□ -2.57
CD28P10747 MIR548A1-201ENST00000385041 97 ntBASIC-1.02□□□□□ -2.57
CD28P10747 MIR4719-201ENST00000585233 84 ntBASIC-1.02□□□□□ -2.57
CD28P10747 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.03□□□□□ -2.57
CD28P10747 MIR147A-201ENST00000385079 72 ntBASIC-1.03□□□□□ -2.57
CD28P10747 SNORA40-201ENST00000388090 126 ntBASIC-1.03□□□□□ -2.57
CD28P10747 SNX3P1X-201ENST00000414887 175 ntBASIC-1.03□□□□□ -2.57
CD28P10747 AC021146.9-201ENST00000512503 156 ntBASIC-1.03□□□□□ -2.57
CD28P10747 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.04□□□□□ -2.58
CD28P10747 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.04□□□□□ -2.58
CD28P10747 SCARNA17-201ENST00000516183 144 ntBASIC-1.04□□□□□ -2.58
CD28P10747 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.04□□□□□ -2.58
CD28P10747 MIR4777-201ENST00000583710 86 ntBASIC-1.04□□□□□ -2.58
CD28P10747 MIR3914-2-201ENST00000637339 95 ntBASIC-1.04□□□□□ -2.58
CD28P10747 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.05□□□□□ -2.58
CD28P10747 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.05□□□□□ -2.58
CD28P10747 RNA5SP292-201ENST00000390974 118 ntBASIC-1.05□□□□□ -2.58
CD28P10747 RNU6-257P-201ENST00000410238 98 ntBASIC-1.05□□□□□ -2.58
CD28P10747 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.05□□□□□ -2.58
CD28P10747 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
CD28P10747 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
CD28P10747 RNU6-519P-201ENST00000410590 108 ntBASIC-1.06□□□□□ -2.58
CD28P10747 RNU7-200P-201ENST00000516105 62 ntBASIC-1.06□□□□□ -2.58
CD28P10747 MIR4464-201ENST00000580818 92 ntBASIC-1.06□□□□□ -2.58
CD28P10747 MIR6738-201ENST00000619620 64 ntBASIC-1.06□□□□□ -2.58
CD28P10747 RNU6-431P-201ENST00000383874 107 ntBASIC-1.07□□□□□ -2.58
CD28P10747 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
CD28P10747 SNORD90-201ENST00000391145 111 ntBASIC-1.07□□□□□ -2.58
CD28P10747 SNORA18.5-201ENST00000516616 101 ntBASIC-1.07□□□□□ -2.58
CD28P10747 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.07□□□□□ -2.58
CD28P10747 AC006254.2-201ENST00000603259 279 ntBASIC-1.07□□□□□ -2.58
CD28P10747 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
CD28P10747 U6.96-201ENST00000636425 70 ntBASIC-1.07□□□□□ -2.58
CD28P10747 MIR4320-201ENST00000636981 65 ntBASIC-1.07□□□□□ -2.58
CD28P10747 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.08□□□□□ -2.58
CD28P10747 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.08□□□□□ -2.58
CD28P10747 RNU6-382P-201ENST00000365181 106 ntBASIC-1.08□□□□□ -2.58
CD28P10747 MTATP6P29-201ENST00000415057 132 ntBASIC-1.08□□□□□ -2.58
CD28P10747 AL500527.2-201ENST00000454105 95 ntBASIC-1.08□□□□□ -2.58
CD28P10747 snoU13.17-201ENST00000458802 104 ntBASIC-1.08□□□□□ -2.58
CD28P10747 RNU7-107P-201ENST00000459121 61 ntBASIC-1.08□□□□□ -2.58
CD28P10747 RNU4-32P-201ENST00000363404 141 ntBASIC-1.09□□□□□ -2.58
CD28P10747 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.09□□□□□ -2.58
CD28P10747 RNU6-10P-201ENST00000384036 107 ntBASIC-1.09□□□□□ -2.58
CD28P10747 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.09□□□□□ -2.58
CD28P10747 RNU6-260P-201ENST00000384092 107 ntBASIC-1.09□□□□□ -2.58
CD28P10747 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.09□□□□□ -2.58
CD28P10747 MIR1468-201ENST00000410600 86 ntBASIC-1.09□□□□□ -2.58
CD28P10747 SNORD18.2-201ENST00000459604 70 ntBASIC-1.09□□□□□ -2.58
CD28P10747 MIR198-201ENST00000637333 62 ntBASIC-1.09□□□□□ -2.58
CD28P10747 RNU6-208P-201ENST00000362431 107 ntBASIC-1.1□□□□□ -2.59
CD28P10747 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.1□□□□□ -2.59
CD28P10747 SNORD64-201ENST00000386683 67 ntBASIC-1.1□□□□□ -2.59
CD28P10747 SNORD33.1-201ENST00000516213 88 ntBASIC-1.1□□□□□ -2.59
CD28P10747 AL353803.5-201ENST00000599815 141 ntBASIC-1.1□□□□□ -2.59
CD28P10747 AC012531.4-201ENST00000616509 177 ntBASIC-1.1□□□□□ -2.59
CD28P10747 U6.95-201ENST00000636931 70 ntBASIC-1.1□□□□□ -2.59
CD28P10747 SNORA2.1-201ENST00000363089 137 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms