Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR154-201ENST00000385243 84 ntBASIC1.06□□□□□ -2.24
PDGFAP04085 NAMPTP3-201ENST00000569273 224 ntBASIC1.06□□□□□ -2.24
PDGFAP04085 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
PDGFAP04085 RNU6-1241P-201ENST00000384536 107 ntBASIC1.05□□□□□ -2.24
PDGFAP04085 ACA64.5-201ENST00000516207 127 ntBASIC1.05□□□□□ -2.24
PDGFAP04085 RNU6-687P-201ENST00000516443 89 ntBASIC1.05□□□□□ -2.24
PDGFAP04085 RNY1P8-201ENST00000383970 114 ntBASIC1.04□□□□□ -2.24
PDGFAP04085 RNU6-110P-201ENST00000384508 104 ntBASIC1.04□□□□□ -2.24
PDGFAP04085 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
PDGFAP04085 AC092634.7-201ENST00000621022 103 ntBASIC1.04□□□□□ -2.24
PDGFAP04085 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PDGFAP04085 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
PDGFAP04085 RNU6-1039P-201ENST00000383931 107 ntBASIC1.03□□□□□ -2.24
PDGFAP04085 AC006210.1-201ENST00000424882 111 ntBASIC1.03□□□□□ -2.24
PDGFAP04085 RNU6-634P-201ENST00000459134 106 ntBASIC1.03□□□□□ -2.24
PDGFAP04085 MIR6509-201ENST00000614603 85 ntBASIC1.03□□□□□ -2.24
PDGFAP04085 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
PDGFAP04085 SNORD114-4-201ENST00000363962 75 ntBASIC1.02□□□□□ -2.25
PDGFAP04085 RNA5SP517-201ENST00000364724 117 ntBASIC1.02□□□□□ -2.25
PDGFAP04085 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
PDGFAP04085 MIR8053-201ENST00000613344 75 ntBASIC1.02□□□□□ -2.25
PDGFAP04085 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
PDGFAP04085 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
PDGFAP04085 SNORD42B-201ENST00000458893 67 ntBASIC1.01□□□□□ -2.25
PDGFAP04085 RNU5B-6P-201ENST00000516765 68 ntBASIC1.01□□□□□ -2.25
PDGFAP04085 SNORD45.1-201ENST00000363181 77 ntBASIC1□□□□□ -2.25
PDGFAP04085 Y_RNA.374-201ENST00000365606 101 ntBASIC1□□□□□ -2.25
PDGFAP04085 SNORD110-201ENST00000408189 75 ntBASIC1□□□□□ -2.25
PDGFAP04085 SNORD71-201ENST00000411292 86 ntBASIC0.99□□□□□ -2.25
PDGFAP04085 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
PDGFAP04085 SNORA40.8-201ENST00000411034 126 ntBASIC0.98□□□□□ -2.25
PDGFAP04085 PSMC1P5-201ENST00000512850 177 ntBASIC0.98□□□□□ -2.25
PDGFAP04085 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
PDGFAP04085 AC114801.3-201ENST00000510231 177 ntBASIC0.97□□□□□ -2.25
PDGFAP04085 MIR5000-201ENST00000577717 103 ntBASIC0.97□□□□□ -2.25
PDGFAP04085 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
PDGFAP04085 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
PDGFAP04085 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PDGFAP04085 SNORD118-201ENST00000363593 134 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 Y_RNA.407-201ENST00000383986 113 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 AC018659.1-201ENST00000551083 169 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
PDGFAP04085 MIR203A-201ENST00000384836 110 ntBASIC0.95□□□□□ -2.26
PDGFAP04085 RNU6-604P-201ENST00000390917 100 ntBASIC0.95□□□□□ -2.26
PDGFAP04085 MIR5706-201ENST00000579841 80 ntBASIC0.95□□□□□ -2.26
PDGFAP04085 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.95□□□□□ -2.26
PDGFAP04085 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
PDGFAP04085 RNU6-260P-201ENST00000384092 107 ntBASIC0.94□□□□□ -2.26
PDGFAP04085 RNU6-895P-201ENST00000384125 103 ntBASIC0.94□□□□□ -2.26
PDGFAP04085 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
PDGFAP04085 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
PDGFAP04085 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
PDGFAP04085 AC069271.1-201ENST00000445577 156 ntBASIC0.93□□□□□ -2.26
PDGFAP04085 MIR3657-201ENST00000584818 117 ntBASIC0.93□□□□□ -2.26
PDGFAP04085 SNORA70.25-201ENST00000612741 95 ntBASIC0.93□□□□□ -2.26
PDGFAP04085 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
PDGFAP04085 SNORD115-31-201ENST00000365318 82 ntBASIC0.92□□□□□ -2.26
PDGFAP04085 MIR4473-201ENST00000583731 91 ntBASIC0.92□□□□□ -2.26
PDGFAP04085 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
PDGFAP04085 SNORA2.1-201ENST00000363089 137 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 SNORD115-22-201ENST00000364456 82 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 SNORD45A-201ENST00000384512 84 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 MIR518A1-201ENST00000385068 85 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 AC139453.2-201ENST00000487255 133 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 RNU6-881P-201ENST00000516813 102 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
PDGFAP04085 RNA5SP457-201ENST00000363657 124 ntBASIC0.9□□□□□ -2.27
PDGFAP04085 RNU6-649P-201ENST00000384463 107 ntBASIC0.9□□□□□ -2.27
PDGFAP04085 SNORD30.1-201ENST00000391309 70 ntBASIC0.9□□□□□ -2.27
PDGFAP04085 RNU6-539P-201ENST00000516665 103 ntBASIC0.9□□□□□ -2.27
PDGFAP04085 U7.6-201ENST00000610841 64 ntBASIC0.9□□□□□ -2.27
PDGFAP04085 RNU6-540P-201ENST00000384622 101 ntBASIC0.89□□□□□ -2.27
PDGFAP04085 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
PDGFAP04085 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
PDGFAP04085 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
PDGFAP04085 RNU6-990P-201ENST00000364385 104 ntBASIC0.88□□□□□ -2.27
PDGFAP04085 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
PDGFAP04085 RNU6-663P-201ENST00000391105 106 ntBASIC0.88□□□□□ -2.27
PDGFAP04085 SCARNA17.3-201ENST00000516381 125 ntBASIC0.88□□□□□ -2.27
PDGFAP04085 uc_338.10-201ENST00000621872 182 ntBASIC0.88□□□□□ -2.27
PDGFAP04085 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PDGFAP04085 SNORD113.1-201ENST00000363280 73 ntBASIC0.87□□□□□ -2.27
PDGFAP04085 RNU1-29P-201ENST00000606574 126 ntBASIC0.87□□□□□ -2.27
PDGFAP04085 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
PDGFAP04085 MIR652-201ENST00000385278 98 ntBASIC0.86□□□□□ -2.27
PDGFAP04085 RNU6-229P-201ENST00000516614 102 ntBASIC0.86□□□□□ -2.27
PDGFAP04085 MIR548AE1-201ENST00000583292 70 ntBASIC0.86□□□□□ -2.27
PDGFAP04085 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
PDGFAP04085 Y_RNA.250-201ENST00000364542 110 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 RNU6-848P-201ENST00000515948 107 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 RNU6-617P-201ENST00000516147 107 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 RNU6-473P-201ENST00000516164 107 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 RNU6-1049P-201ENST00000516414 107 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 MIR1273G-201ENST00000577677 100 ntBASIC0.85□□□□□ -2.27
PDGFAP04085 RNU6-1216P-201ENST00000362590 107 ntBASIC0.84□□□□□ -2.27
PDGFAP04085 Y_RNA.178-201ENST00000363832 102 ntBASIC0.84□□□□□ -2.27
PDGFAP04085 Y_RNA.423-201ENST00000384057 113 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms