Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 SNORA13-201ENST00000458790 133 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 SNORD18.2-201ENST00000459604 70 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 SNORD22.1-201ENST00000516331 125 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-762P-201ENST00000517107 102 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 AC068339.1-201ENST00000526965 141 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 MIR3179-1-201ENST00000578940 84 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 MIR3179-2-201ENST00000579107 84 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 MIR3179-3-201ENST00000579566 84 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 U7.2-201ENST00000607576 63 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 MIR3179-4-201ENST00000617599 84 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 SNORD115-25-201ENST00000362619 82 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-132P-201ENST00000383863 107 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-80P-201ENST00000384195 107 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-935P-201ENST00000410371 100 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU7-24P-201ENST00000458867 62 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 SNORD4B-201ENST00000459083 72 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-881P-201ENST00000516813 102 ntBASIC-0.53□□□□□ -2.49
COL4A1P02462 RNU6-973P-201ENST00000364690 107 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 RNU6-260P-201ENST00000384092 107 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 SNORD83B-201ENST00000386745 93 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 MTATP6P29-201ENST00000415057 132 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 MTND4LP9-201ENST00000427694 174 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 AP000533.3-201ENST00000447704 118 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 snoU13.13-201ENST00000458842 104 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 CYP3A54P-201ENST00000566950 75 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 MIR3140-201ENST00000583685 90 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 MIR4439-201ENST00000583746 80 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 MIR548Z-201ENST00000584743 97 ntBASIC-0.54□□□□□ -2.5
COL4A1P02462 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 SNORD58A-201ENST00000383875 65 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 RNU6-804P-201ENST00000384286 107 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 RNU6-905P-201ENST00000384434 107 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 MIR548A1-201ENST00000385041 97 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 snoU13.17-201ENST00000458802 104 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 RNU6-426P-201ENST00000516464 97 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 RNU6-182P-201ENST00000516970 105 ntBASIC-0.55□□□□□ -2.5
COL4A1P02462 SNORA63.2-201ENST00000362603 126 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 SNORD45B-201ENST00000364617 72 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 SNORD58C-201ENST00000365223 64 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 AC097510.1-201ENST00000510945 133 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 RNA5SP180-201ENST00000516181 101 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 MIR6773-201ENST00000612812 74 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 SNORD116-18-201ENST00000383961 92 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 RNU6-24P-201ENST00000384440 107 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 MIRLET7B-201ENST00000385140 83 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 RNU6-644P-201ENST00000391155 98 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 MTND5P41-201ENST00000517498 206 ntBASIC-0.56□□□□□ -2.5
COL4A1P02462 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.57□□□□□ -2.5
COL4A1P02462 MIR4694-201ENST00000578534 80 ntBASIC-0.57□□□□□ -2.5
COL4A1P02462 MIR5009-201ENST00000578736 100 ntBASIC-0.57□□□□□ -2.5
COL4A1P02462 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR569-201ENST00000385228 96 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 SNORA40-201ENST00000388090 126 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR548U-201ENST00000390728 81 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 SNORA18.5-201ENST00000516616 101 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR5704-201ENST00000584029 77 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR4719-201ENST00000585233 84 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR6509-201ENST00000614603 85 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 MIR1246-201ENST00000636535 73 ntBASIC-0.58□□□□□ -2.5
COL4A1P02462 RNY3P2-201ENST00000362918 102 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 AC022137.1-201ENST00000483735 151 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 FGF7P7-201ENST00000514120 227 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 RNA5SP470-201ENST00000516463 106 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 RNU6-62P-201ENST00000516526 102 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 AL157777.2-201ENST00000258070 137 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 RNU6-208P-201ENST00000362431 107 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 RNU4-36P-201ENST00000364294 144 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 MIR582-201ENST00000365731 98 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 MIR203A-201ENST00000384836 110 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 MIR124-2-201ENST00000385081 109 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 MIR517B-201ENST00000385102 67 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
COL4A1P02462 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.59□□□□□ -2.5
COL4A1P02462 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.6□□□□□ -2.51
COL4A1P02462 RNU6-119P-201ENST00000364882 107 ntBASIC-0.6□□□□□ -2.51
COL4A1P02462 RNU6-813P-201ENST00000384691 107 ntBASIC-0.6□□□□□ -2.51
COL4A1P02462 RNU6-257P-201ENST00000410238 98 ntBASIC-0.6□□□□□ -2.51
COL4A1P02462 MIR4777-201ENST00000583710 86 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 246.5 ms