Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MALAT1.1-201ENST00000618249 95 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 SNORA63.2-201ENST00000362603 126 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 SNORD114-31-201ENST00000363219 75 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 Y_RNA.190-201ENST00000363964 101 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 RNU6-153P-201ENST00000364422 104 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 RNU6-652P-201ENST00000365488 107 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 SNORA24B-201ENST00000384176 131 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 MIR892B-201ENST00000401279 77 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 Y_RNA.609-201ENST00000410669 89 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 IGLVI-20-201ENST00000519296 130 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 MIR548AE1-201ENST00000583292 70 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 MIR4473-201ENST00000583731 91 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 AP001180.6-201ENST00000584918 159 ntBASIC0.06□□□□□ -2.4
CLDN1O95832 MIR610-201ENST00000385139 96 ntBASIC0.05□□□□□ -2.4
CLDN1O95832 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
CLDN1O95832 Y_RNA.407-201ENST00000383986 113 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 RNU6V-201ENST00000384105 107 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 RNU5B-6P-201ENST00000516765 68 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
CLDN1O95832 MIR488-201ENST00000365739 83 ntBASIC0.03□□□□□ -2.4
CLDN1O95832 Y_RNA.437-201ENST00000384113 113 ntBASIC0.03□□□□□ -2.4
CLDN1O95832 MIR516B1-201ENST00000385211 90 ntBASIC0.03□□□□□ -2.4
CLDN1O95832 RNU6-168P-201ENST00000516189 101 ntBASIC0.03□□□□□ -2.4
CLDN1O95832 SNORA18.5-201ENST00000516616 101 ntBASIC0.03□□□□□ -2.4
CLDN1O95832 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
CLDN1O95832 Y_RNA.81-201ENST00000362997 102 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 RNU6-1051P-201ENST00000365471 102 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 MIR604-201ENST00000384880 94 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 SCARNA11.2-201ENST00000517183 154 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 uc_338.10-201ENST00000621872 182 ntBASIC0.02□□□□□ -2.41
CLDN1O95832 MIR409-201ENST00000362237 79 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 RNU4-32P-201ENST00000363404 141 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 SNORD95.1-201ENST00000364099 68 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 RNU6-497P-201ENST00000365316 104 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 RNU6-54P-201ENST00000365563 107 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 FGF7P7-201ENST00000514120 227 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 MIR3140-201ENST00000583685 90 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 AC108676.2-201ENST00000605225 163 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 AC084368.1-201ENST00000620935 65 ntBASIC0.01□□□□□ -2.41
CLDN1O95832 MIR148A-201ENST00000362215 68 ntBASIC0□□□□□ -2.41
CLDN1O95832 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
CLDN1O95832 RNU6-154P-201ENST00000384306 106 ntBASIC0□□□□□ -2.41
CLDN1O95832 SNORD90-201ENST00000391145 111 ntBASIC0□□□□□ -2.41
CLDN1O95832 MIR1236-201ENST00000408340 102 ntBASIC0□□□□□ -2.41
CLDN1O95832 RNA5SP89-201ENST00000410300 108 ntBASIC0□□□□□ -2.41
CLDN1O95832 RNU6-633P-201ENST00000362612 103 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 SNORD115-27-201ENST00000364430 82 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 MIR106A-201ENST00000384870 81 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 RNU7-188P-201ENST00000517063 64 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 CR383656.4-201ENST00000546909 122 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 MIR4796-201ENST00000580742 81 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 MIR4668-201ENST00000582284 70 ntBASIC-0.01□□□□□ -2.41
CLDN1O95832 RNU6-219P-201ENST00000364728 107 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 MTATP6P29-201ENST00000415057 132 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 RNU7-24P-201ENST00000458867 62 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 RNU7-159P-201ENST00000459284 62 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 AC104692.1-201ENST00000472406 90 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 RN7SL660P-201ENST00000614852 299 ntBASIC-0.02□□□□□ -2.41
CLDN1O95832 RNU6-495P-201ENST00000362995 107 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 MIR652-201ENST00000385278 98 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CLDN1O95832 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CLDN1O95832 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 RNA5SP163-201ENST00000410304 99 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 SNORD42B-201ENST00000458893 67 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 RNU6-719P-201ENST00000516671 104 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 RNU6-175P-201ENST00000516896 107 ntBASIC-0.03□□□□□ -2.41
CLDN1O95832 MIR101-1-201ENST00000362265 75 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 MIR20A-201ENST00000362279 71 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 RNU5F-1-201ENST00000362507 117 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 SNORD116-22-201ENST00000384430 92 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 MIR519C-201ENST00000385053 87 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 AC244090.1-201ENST00000441884 93 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 MIR6514-201ENST00000622549 70 ntBASIC-0.04□□□□□ -2.42
CLDN1O95832 SNORD114-4-201ENST00000363962 75 ntBASIC-0.05□□□□□ -2.42
CLDN1O95832 RNU6-302P-201ENST00000365249 107 ntBASIC-0.05□□□□□ -2.42
CLDN1O95832 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
CLDN1O95832 SNORD75.2-201ENST00000408784 58 ntBASIC-0.05□□□□□ -2.42
CLDN1O95832 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
CLDN1O95832 RNU6-675P-201ENST00000384236 104 ntBASIC-0.06□□□□□ -2.42
CLDN1O95832 RNU7-153P-201ENST00000516455 62 ntBASIC-0.06□□□□□ -2.42
CLDN1O95832 RNY1P7-201ENST00000384743 110 ntBASIC-0.07□□□□□ -2.42
CLDN1O95832 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CLDN1O95832 RNU6-844P-201ENST00000517175 102 ntBASIC-0.07□□□□□ -2.42
CLDN1O95832 RNU6-46P-201ENST00000383860 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms