Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC244090.1-201ENST00000441884 93 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 snoU13.13-201ENST00000458842 104 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 RNU6-719P-201ENST00000516671 104 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 RNA5SP66-201ENST00000517178 101 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
RTN3O95197 SNORD116-21-201ENST00000384507 92 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-644P-201ENST00000391155 98 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.51□□□□□ -2.49
RTN3O95197 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 MIR548E-201ENST00000408287 88 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU7-85P-201ENST00000458851 63 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 AC103810.7-201ENST00000607821 91 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.52□□□□□ -2.49
RTN3O95197 RNU6-900P-201ENST00000384498 102 ntBASIC-0.53□□□□□ -2.49
RTN3O95197 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 MIR5704-201ENST00000584029 77 ntBASIC-0.54□□□□□ -2.5
RTN3O95197 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-132P-201ENST00000383863 107 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-476P-201ENST00000384726 107 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 MIR548U-201ENST00000390728 81 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU7-55P-201ENST00000459426 62 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 AC093726.3-201ENST00000637588 150 ntBASIC-0.55□□□□□ -2.5
RTN3O95197 RNU6-959P-201ENST00000384671 107 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MT-TR-201ENST00000387439 65 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MIR3140-201ENST00000583685 90 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 MIR8068-201ENST00000618032 68 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
RTN3O95197 SNORD114-4-201ENST00000363962 75 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 RNU6-901P-201ENST00000384593 106 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 AC008267.6-201ENST00000441664 139 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.57□□□□□ -2.5
RTN3O95197 FGF7P7-201ENST00000514120 227 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 MIR4777-201ENST00000583710 86 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 MIR548Z-201ENST00000584743 97 ntBASIC-0.57□□□□□ -2.5
RTN3O95197 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.57□□□□□ -2.5
RTN3O95197 RNU6-502P-201ENST00000362419 108 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 SNORD90-201ENST00000391145 111 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 MIR6851-201ENST00000617060 67 ntBASIC-0.58□□□□□ -2.5
RTN3O95197 SNORD2-201ENST00000459163 69 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 SCARNA23-201ENST00000516060 130 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 RNU6-795P-201ENST00000516323 103 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 AC012531.4-201ENST00000616509 177 ntBASIC-0.59□□□□□ -2.5
RTN3O95197 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-519P-201ENST00000410590 108 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 SNORD4B-201ENST00000459083 72 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 MIR198-201ENST00000637333 62 ntBASIC-0.6□□□□□ -2.51
RTN3O95197 RNU6-990P-201ENST00000364385 104 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
RTN3O95197 RNU6-904P-201ENST00000516206 101 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 MIR3064-201ENST00000581130 66 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 AC104996.3-201ENST00000590718 94 ntBASIC-0.61□□□□□ -2.51
RTN3O95197 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 RNU6-972P-201ENST00000391208 107 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
RTN3O95197 SNORA63.2-201ENST00000362603 126 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-973P-201ENST00000364690 107 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-81P-201ENST00000365608 104 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORA24B-201ENST00000384176 131 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNU6-905P-201ENST00000384434 107 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 RNA5SP292-201ENST00000390974 118 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 SNORA40.17-201ENST00000517256 115 ntBASIC-0.63□□□□□ -2.51
RTN3O95197 MIR1302-5-201ENST00000408164 150 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 MIR548M-201ENST00000408260 86 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.64□□□□□ -2.51
RTN3O95197 MIR6773-201ENST00000612812 74 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 AC090617.8-201ENST00000623339 167 ntBASIC-0.64□□□□□ -2.51
RTN3O95197 RNU6-495P-201ENST00000362995 107 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 MIR601-201ENST00000385256 79 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 SNORA19.1-201ENST00000410656 129 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 SNORD22.1-201ENST00000516331 125 ntBASIC-0.65□□□□□ -2.51
RTN3O95197 MIR587-201ENST00000384845 96 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 RNU6-887P-201ENST00000410660 100 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
RTN3O95197 MIRLET7B-201ENST00000385140 83 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
RTN3O95197 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 RNU6-592P-201ENST00000411333 103 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-1-201ENST00000578940 84 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-2-201ENST00000579107 84 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-3-201ENST00000579566 84 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms