Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 Y_RNA.219-201ENST00000364232 113 ntBASIC0.46□□□□□ -2.34
CACNA1FO60840 MT-TY-201ENST00000387409 66 ntBASIC0.46□□□□□ -2.34
CACNA1FO60840 RNU6-1177P-201ENST00000391058 104 ntBASIC0.46□□□□□ -2.34
CACNA1FO60840 RNU6-1108P-201ENST00000516308 104 ntBASIC0.46□□□□□ -2.34
CACNA1FO60840 Y_RNA.685-201ENST00000516532 108 ntBASIC0.46□□□□□ -2.34
CACNA1FO60840 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CACNA1FO60840 SNORA36.1-201ENST00000363424 132 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 RNA5SP403-201ENST00000363598 108 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 SNORA2A-201ENST00000383885 135 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 SNORA8.2-201ENST00000384372 139 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 RNU6-269P-201ENST00000391077 97 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 SNORA9.1-201ENST00000362412 131 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 Y_RNA.264-201ENST00000364665 102 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 SNORD110-201ENST00000408189 75 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 AC104996.3-201ENST00000590718 94 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 MIR6086-201ENST00000638065 55 ntBASIC0.45□□□□□ -2.34
CACNA1FO60840 RNU6-478P-201ENST00000363904 110 ntBASIC0.44□□□□□ -2.34
CACNA1FO60840 SCARNA16.5-201ENST00000517114 183 ntBASIC0.44□□□□□ -2.34
CACNA1FO60840 RNU6-495P-201ENST00000362995 107 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 RNU6-242P-201ENST00000384359 107 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 RNU2-59P-201ENST00000410482 191 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 RNU7-24P-201ENST00000458867 62 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 MIR3675-201ENST00000583661 73 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 MIR6759-201ENST00000638110 65 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1FO60840 HMGN2P22-201ENST00000427588 175 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 RNU6-857P-201ENST00000515893 110 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
CACNA1FO60840 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 U3.27-201ENST00000391237 200 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 AC093423.1-201ENST00000440817 142 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 AL691482.2-201ENST00000457453 84 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 RNU6-274P-201ENST00000459566 107 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 MIR6828-201ENST00000636181 60 ntBASIC0.42□□□□□ -2.34
CACNA1FO60840 Y_RNA.94-201ENST00000363068 106 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 RNU1-141P-201ENST00000364623 158 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR203A-201ENST00000384836 110 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 RNA5SP268-201ENST00000516828 124 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 RNU6-303P-201ENST00000517091 106 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR5706-201ENST00000579841 80 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 RNU6-315P-201ENST00000362666 107 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR516B1-201ENST00000385211 90 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR7107-201ENST00000611489 80 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR6509-201ENST00000614603 85 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 uc_338.10-201ENST00000621872 182 ntBASIC0.41□□□□□ -2.34
CACNA1FO60840 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 RNU6-1094P-201ENST00000362416 104 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 RNU6-35P-201ENST00000384530 107 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 SNORD75.2-201ENST00000408784 58 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CACNA1FO60840 RNU6-340P-201ENST00000364005 107 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 AC097510.1-201ENST00000510945 133 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 RNU6-70P-201ENST00000516438 60 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 RNU5B-6P-201ENST00000516765 68 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CACNA1FO60840 SNORA24B-201ENST00000384176 131 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 MIR154-201ENST00000385243 84 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 RNA5SP299-201ENST00000391203 116 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 FGF7P7-201ENST00000514120 227 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 RNU6-863P-201ENST00000515989 104 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 Y_RNA.660-201ENST00000516002 120 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 MIR4473-201ENST00000583731 91 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 MIR4712-201ENST00000583750 82 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 RNU1-29P-201ENST00000606574 126 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 SNORA70.25-201ENST00000612741 95 ntBASIC0.39□□□□□ -2.35
CACNA1FO60840 MIRLET7A1-201ENST00000362295 80 ntBASIC0.38□□□□□ -2.35
CACNA1FO60840 Y_RNA.125-201ENST00000363371 111 ntBASIC0.38□□□□□ -2.35
CACNA1FO60840 SNORD115-22-201ENST00000364456 82 ntBASIC0.38□□□□□ -2.35
CACNA1FO60840 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
CACNA1FO60840 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.38□□□□□ -2.35
CACNA1FO60840 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
CACNA1FO60840 RNU6-824P-201ENST00000363724 104 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 RNU6-129P-201ENST00000391022 107 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 RNU6-557P-201ENST00000516842 110 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 Y_RNA.316-201ENST00000365118 111 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 Y_RNA.532-201ENST00000384590 113 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 AL627230.5-201ENST00000619807 58 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 MIR6739-201ENST00000622461 75 ntBASIC0.37□□□□□ -2.35
CACNA1FO60840 RNU6-54P-201ENST00000365563 107 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CACNA1FO60840 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CACNA1FO60840 RNA5SP484-201ENST00000458857 111 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 SNORD2-201ENST00000459163 69 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR4460-201ENST00000577862 86 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR5589-201ENST00000579442 60 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR4773-1-201ENST00000637203 78 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR20A-201ENST00000362279 71 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 Y_RNA.244-201ENST00000364484 109 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms