Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
LDB2O43679 Y_RNA.30-201ENST00000362572 97 ntBASIC0.22□□□□□ -2.37
LDB2O43679 Y_RNA.407-201ENST00000383986 113 ntBASIC0.22□□□□□ -2.37
LDB2O43679 Y_RNA.437-201ENST00000384113 113 ntBASIC0.22□□□□□ -2.37
LDB2O43679 RNU6-127P-201ENST00000390897 107 ntBASIC0.22□□□□□ -2.37
LDB2O43679 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
LDB2O43679 AL109933.3-201ENST00000619095 188 ntBASIC0.22□□□□□ -2.37
LDB2O43679 Y_RNA.611-201ENST00000410682 108 ntBASIC0.21□□□□□ -2.38
LDB2O43679 IGLL4P-201ENST00000614590 133 ntBASIC0.21□□□□□ -2.38
LDB2O43679 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
LDB2O43679 RNY1P1-201ENST00000364372 112 ntBASIC0.2□□□□□ -2.38
LDB2O43679 RNU6-54P-201ENST00000365563 107 ntBASIC0.2□□□□□ -2.38
LDB2O43679 RNU6-1177P-201ENST00000391058 104 ntBASIC0.2□□□□□ -2.38
LDB2O43679 RNU6-782P-201ENST00000516852 104 ntBASIC0.2□□□□□ -2.38
LDB2O43679 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.2□□□□□ -2.38
LDB2O43679 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
LDB2O43679 uc_338.10-201ENST00000621872 182 ntBASIC0.2□□□□□ -2.38
LDB2O43679 Y_RNA.43-201ENST00000362670 111 ntBASIC0.19□□□□□ -2.38
LDB2O43679 RNU6-652P-201ENST00000365488 107 ntBASIC0.19□□□□□ -2.38
LDB2O43679 MIR548AE1-201ENST00000583292 70 ntBASIC0.19□□□□□ -2.38
LDB2O43679 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
LDB2O43679 RNU6-1255P-201ENST00000363434 112 ntBASIC0.18□□□□□ -2.38
LDB2O43679 MIR450A2-201ENST00000385022 100 ntBASIC0.18□□□□□ -2.38
LDB2O43679 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
LDB2O43679 AC140658.3-201ENST00000567603 271 ntBASIC0.18□□□□□ -2.38
LDB2O43679 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
LDB2O43679 MIR516B1-201ENST00000385211 90 ntBASIC0.17□□□□□ -2.38
LDB2O43679 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
LDB2O43679 AC097510.1-201ENST00000510945 133 ntBASIC0.17□□□□□ -2.38
LDB2O43679 AC084368.1-201ENST00000620935 65 ntBASIC0.17□□□□□ -2.38
LDB2O43679 RNU6-495P-201ENST00000362995 107 ntBASIC0.16□□□□□ -2.38
LDB2O43679 SNORD114-4-201ENST00000363962 75 ntBASIC0.16□□□□□ -2.38
LDB2O43679 RNU6-154P-201ENST00000384306 106 ntBASIC0.16□□□□□ -2.38
LDB2O43679 MIR643-201ENST00000385267 97 ntBASIC0.16□□□□□ -2.38
LDB2O43679 SNORA75.1-201ENST00000391130 148 ntBASIC0.16□□□□□ -2.38
LDB2O43679 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
LDB2O43679 AL450471.1-201ENST00000447509 127 ntBASIC0.16□□□□□ -2.38
LDB2O43679 snoU13.17-201ENST00000458802 104 ntBASIC0.16□□□□□ -2.38
LDB2O43679 RNU7-24P-201ENST00000458867 62 ntBASIC0.16□□□□□ -2.38
LDB2O43679 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.16□□□□□ -2.38
LDB2O43679 MIR3925-201ENST00000584674 77 ntBASIC0.16□□□□□ -2.38
LDB2O43679 AC006160.2-201ENST00000637708 154 ntBASIC0.16□□□□□ -2.38
LDB2O43679 Y_RNA.73-201ENST00000362910 113 ntBASIC0.15□□□□□ -2.39
LDB2O43679 RNU6-624P-201ENST00000363411 107 ntBASIC0.15□□□□□ -2.39
LDB2O43679 Y_RNA.426-201ENST00000384068 113 ntBASIC0.15□□□□□ -2.39
LDB2O43679 SNORD77.2-201ENST00000391045 68 ntBASIC0.15□□□□□ -2.39
LDB2O43679 MIR876-201ENST00000401147 81 ntBASIC0.15□□□□□ -2.39
LDB2O43679 SNORD75.2-201ENST00000408784 58 ntBASIC0.15□□□□□ -2.39
LDB2O43679 MIR5588-201ENST00000581890 63 ntBASIC0.15□□□□□ -2.39
LDB2O43679 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
LDB2O43679 RNU6-208P-201ENST00000362431 107 ntBASIC0.14□□□□□ -2.39
LDB2O43679 Y_RNA.264-201ENST00000364665 102 ntBASIC0.14□□□□□ -2.39
LDB2O43679 SNORD114-29-201ENST00000364819 70 ntBASIC0.14□□□□□ -2.39
LDB2O43679 MIR610-201ENST00000385139 96 ntBASIC0.14□□□□□ -2.39
LDB2O43679 MIR652-201ENST00000385278 98 ntBASIC0.14□□□□□ -2.39
LDB2O43679 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
LDB2O43679 SNORD42B-201ENST00000458893 67 ntBASIC0.14□□□□□ -2.39
LDB2O43679 RNU6-762P-201ENST00000517107 102 ntBASIC0.14□□□□□ -2.39
LDB2O43679 SCARNA11.2-201ENST00000517183 154 ntBASIC0.14□□□□□ -2.39
LDB2O43679 AC006254.2-201ENST00000603259 279 ntBASIC0.14□□□□□ -2.39
LDB2O43679 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
LDB2O43679 MIR494-201ENST00000349529 81 ntBASIC0.13□□□□□ -2.39
LDB2O43679 RNU6-161P-201ENST00000363051 106 ntBASIC0.13□□□□□ -2.39
LDB2O43679 RNU6-979P-201ENST00000383896 107 ntBASIC0.13□□□□□ -2.39
LDB2O43679 Y_RNA.607-201ENST00000410597 98 ntBASIC0.13□□□□□ -2.39
LDB2O43679 Y_RNA.660-201ENST00000516002 120 ntBASIC0.13□□□□□ -2.39
LDB2O43679 SCARNA17.3-201ENST00000516381 125 ntBASIC0.13□□□□□ -2.39
LDB2O43679 MIR4743-201ENST00000584576 69 ntBASIC0.13□□□□□ -2.39
LDB2O43679 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
LDB2O43679 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
LDB2O43679 RNU6-824P-201ENST00000363724 104 ntBASIC0.12□□□□□ -2.39
LDB2O43679 Y_RNA.374-201ENST00000365606 101 ntBASIC0.12□□□□□ -2.39
LDB2O43679 RNU6-820P-201ENST00000384273 107 ntBASIC0.12□□□□□ -2.39
LDB2O43679 RNU6-592P-201ENST00000411333 103 ntBASIC0.12□□□□□ -2.39
LDB2O43679 AC022137.1-201ENST00000483735 151 ntBASIC0.12□□□□□ -2.39
LDB2O43679 RNU6-557P-201ENST00000516842 110 ntBASIC0.12□□□□□ -2.39
LDB2O43679 RNU7-188P-201ENST00000517063 64 ntBASIC0.12□□□□□ -2.39
LDB2O43679 U6.81-201ENST00000612550 106 ntBASIC0.12□□□□□ -2.39
LDB2O43679 MIR20A-201ENST00000362279 71 ntBASIC0.11□□□□□ -2.39
LDB2O43679 RNA5SP257-201ENST00000363023 116 ntBASIC0.11□□□□□ -2.39
LDB2O43679 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
LDB2O43679 RNU6-382P-201ENST00000365181 106 ntBASIC0.11□□□□□ -2.39
LDB2O43679 MIR548H2-201ENST00000408874 88 ntBASIC0.11□□□□□ -2.39
LDB2O43679 RNU6-242P-201ENST00000384359 107 ntBASIC0.1□□□□□ -2.39
LDB2O43679 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
LDB2O43679 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
LDB2O43679 Y_RNA.606-201ENST00000410579 103 ntBASIC0.1□□□□□ -2.39
LDB2O43679 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.1□□□□□ -2.39
LDB2O43679 AC244090.1-201ENST00000441884 93 ntBASIC0.1□□□□□ -2.39
LDB2O43679 RNU6-1108P-201ENST00000516308 104 ntBASIC0.1□□□□□ -2.39
LDB2O43679 MIR4773-1-201ENST00000637203 78 ntBASIC0.1□□□□□ -2.39
LDB2O43679 RNU6-274P-201ENST00000459566 107 ntBASIC0.09□□□□□ -2.4
LDB2O43679 RNU7-171P-201ENST00000459581 62 ntBASIC0.09□□□□□ -2.4
LDB2O43679 RNU6-129P-201ENST00000391022 107 ntBASIC0.08□□□□□ -2.4
LDB2O43679 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.08□□□□□ -2.4
LDB2O43679 AC062037.1-201ENST00000605302 128 ntBASIC0.08□□□□□ -2.4
LDB2O43679 Y_RNA.12-201ENST00000362393 112 ntBASIC0.07□□□□□ -2.4
LDB2O43679 RNU6-340P-201ENST00000364005 107 ntBASIC0.07□□□□□ -2.4
LDB2O43679 RNU6-681P-201ENST00000364012 104 ntBASIC0.07□□□□□ -2.4
LDB2O43679 SNORD73B-201ENST00000364394 72 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms