Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
PHF1O43189 SNORA63.2-201ENST00000362603 126 ntBASIC0.04□□□□□ -2.4
PHF1O43189 Y_RNA.491-201ENST00000384417 107 ntBASIC0.04□□□□□ -2.4
PHF1O43189 RNU6-905P-201ENST00000384434 107 ntBASIC0.04□□□□□ -2.4
PHF1O43189 Y_RNA.495-201ENST00000384435 112 ntBASIC0.04□□□□□ -2.4
PHF1O43189 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
PHF1O43189 RNA5SP292-201ENST00000390974 118 ntBASIC0.04□□□□□ -2.4
PHF1O43189 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
PHF1O43189 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
PHF1O43189 MIR548AE1-201ENST00000583292 70 ntBASIC0.04□□□□□ -2.4
PHF1O43189 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
PHF1O43189 Y_RNA.190-201ENST00000363964 101 ntBASIC0.03□□□□□ -2.4
PHF1O43189 Y_RNA.407-201ENST00000383986 113 ntBASIC0.03□□□□□ -2.4
PHF1O43189 RNU6V-201ENST00000384105 107 ntBASIC0.03□□□□□ -2.4
PHF1O43189 MIR604-201ENST00000384880 94 ntBASIC0.03□□□□□ -2.4
PHF1O43189 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
PHF1O43189 RNU6-162P-201ENST00000516228 103 ntBASIC0.03□□□□□ -2.4
PHF1O43189 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
PHF1O43189 RNU5B-6P-201ENST00000516765 68 ntBASIC0.03□□□□□ -2.4
PHF1O43189 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
PHF1O43189 Y_RNA.437-201ENST00000384113 113 ntBASIC0.02□□□□□ -2.41
PHF1O43189 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
PHF1O43189 Y_RNA.609-201ENST00000410669 89 ntBASIC0.02□□□□□ -2.41
PHF1O43189 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
PHF1O43189 MIR4473-201ENST00000583731 91 ntBASIC0.02□□□□□ -2.41
PHF1O43189 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
PHF1O43189 MALAT1.1-201ENST00000618249 95 ntBASIC0.02□□□□□ -2.41
PHF1O43189 RNU6-153P-201ENST00000364422 104 ntBASIC0.01□□□□□ -2.41
PHF1O43189 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
PHF1O43189 MIR516B1-201ENST00000385211 90 ntBASIC0.01□□□□□ -2.41
PHF1O43189 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
PHF1O43189 SNORA18.5-201ENST00000516616 101 ntBASIC0.01□□□□□ -2.41
PHF1O43189 SCARNA11.2-201ENST00000517183 154 ntBASIC0.01□□□□□ -2.41
PHF1O43189 uc_338.10-201ENST00000621872 182 ntBASIC0.01□□□□□ -2.41
PHF1O43189 MIR409-201ENST00000362237 79 ntBASIC0□□□□□ -2.41
PHF1O43189 RNU6-497P-201ENST00000365316 104 ntBASIC0□□□□□ -2.41
PHF1O43189 RNU6-1051P-201ENST00000365471 102 ntBASIC0□□□□□ -2.41
PHF1O43189 MIR488-201ENST00000365739 83 ntBASIC0□□□□□ -2.41
PHF1O43189 Y_RNA.660-201ENST00000516002 120 ntBASIC0□□□□□ -2.41
PHF1O43189 AC084368.1-201ENST00000620935 65 ntBASIC0□□□□□ -2.41
PHF1O43189 MIR148A-201ENST00000362215 68 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 RNU6-54P-201ENST00000365563 107 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 MIR106A-201ENST00000384870 81 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 SNORD90-201ENST00000391145 111 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 CR383656.4-201ENST00000546909 122 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 MIR3140-201ENST00000583685 90 ntBASIC-0.01□□□□□ -2.41
PHF1O43189 RNU6-154P-201ENST00000384306 106 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 MIR1236-201ENST00000408340 102 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 FGF7P7-201ENST00000514120 227 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 RNU6-168P-201ENST00000516189 101 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 RNU6-175P-201ENST00000516896 107 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 RNU7-188P-201ENST00000517063 64 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 RN7SL660P-201ENST00000614852 299 ntBASIC-0.02□□□□□ -2.41
PHF1O43189 RNU6-633P-201ENST00000362612 103 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 RNU6-495P-201ENST00000362995 107 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 RNU4-32P-201ENST00000363404 141 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 SNORD114-29-201ENST00000364819 70 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 MIR652-201ENST00000385278 98 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 RNU7-24P-201ENST00000458867 62 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 SNORD42B-201ENST00000458893 67 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 RNA5SP67-201ENST00000516422 131 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.03□□□□□ -2.41
PHF1O43189 SNORD95.1-201ENST00000364099 68 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 SNORD115-27-201ENST00000364430 82 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 RNU6-219P-201ENST00000364728 107 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 RNA5SP89-201ENST00000410300 108 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 MTATP6P29-201ENST00000415057 132 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 AC244090.1-201ENST00000441884 93 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 RNU7-159P-201ENST00000459284 62 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 MIR4796-201ENST00000580742 81 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 MIR4668-201ENST00000582284 70 ntBASIC-0.04□□□□□ -2.42
PHF1O43189 MIR101-1-201ENST00000362265 75 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PHF1O43189 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 RNA5SP163-201ENST00000410304 99 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 RNU6-719P-201ENST00000516671 104 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 MIR6514-201ENST00000622549 70 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
PHF1O43189 MIR20A-201ENST00000362279 71 ntBASIC-0.06□□□□□ -2.42
PHF1O43189 MIR519C-201ENST00000385053 87 ntBASIC-0.06□□□□□ -2.42
PHF1O43189 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PHF1O43189 SNORD75.2-201ENST00000408784 58 ntBASIC-0.06□□□□□ -2.42
PHF1O43189 SNORD114-4-201ENST00000363962 75 ntBASIC-0.07□□□□□ -2.42
PHF1O43189 RNU6-675P-201ENST00000384236 104 ntBASIC-0.07□□□□□ -2.42
PHF1O43189 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
PHF1O43189 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
PHF1O43189 AC104692.1-201ENST00000472406 90 ntBASIC-0.07□□□□□ -2.42
PHF1O43189 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
PHF1O43189 RNU5F-1-201ENST00000362507 117 ntBASIC-0.08□□□□□ -2.42
PHF1O43189 RNU6-46P-201ENST00000383860 107 ntBASIC-0.08□□□□□ -2.42
PHF1O43189 SNORD116-22-201ENST00000384430 92 ntBASIC-0.08□□□□□ -2.42
PHF1O43189 MIR548E-201ENST00000408287 88 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms