Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-310P-201ENST00000384655 107 ntBASIC-3.62□□□□□ -2.99
CHD1O14646 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 RNU6-409P-201ENST00000384114 104 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 RNU6-1119P-201ENST00000384349 108 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 SNORD116-6-201ENST00000384711 96 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 MIR3064-201ENST00000581130 66 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 U6.97-201ENST00000636904 101 ntBASIC-3.63□□□□□ -2.99
CHD1O14646 MIR3163-201ENST00000581592 73 ntBASIC-3.64□□□□□ -2.99
CHD1O14646 RNU6-682P-201ENST00000363843 106 ntBASIC-3.64□□□□□ -2.99
CHD1O14646 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.64□□□□□ -2.99
CHD1O14646 RNU6-578P-201ENST00000390980 103 ntBASIC-3.64□□□□□ -2.99
CHD1O14646 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.64□□□□□ -2.99
CHD1O14646 RNU6-151P-201ENST00000364158 107 ntBASIC-3.65□□□□□ -2.99
CHD1O14646 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.65□□□□□ -2.99
CHD1O14646 RNU6-314P-201ENST00000516574 104 ntBASIC-3.65□□□□□ -2.99
CHD1O14646 MIR548A3-201ENST00000385297 97 ntBASIC-3.66□□□□□ -3
CHD1O14646 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.66□□□□□ -3
CHD1O14646 RBMX2P4-201ENST00000441256 376 ntBASIC-3.66□□□□□ -3
CHD1O14646 MIR548Z-201ENST00000584743 97 ntBASIC-3.66□□□□□ -3
CHD1O14646 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.67□□□□□ -3
CHD1O14646 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.67□□□□□ -3
CHD1O14646 RNU6-309P-201ENST00000364573 106 ntBASIC-3.67□□□□□ -3
CHD1O14646 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.67□□□□□ -3
CHD1O14646 MT-TI-201ENST00000387365 69 ntBASIC-3.67□□□□□ -3
CHD1O14646 AC025253.1-201ENST00000613623 543 ntBASIC-3.67□□□□□ -3
CHD1O14646 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.67□□□□□ -3
CHD1O14646 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.67□□□□□ -3
CHD1O14646 RNU6-290P-201ENST00000365212 101 ntBASIC-3.67□□□□□ -3
CHD1O14646 RNU6-890P-201ENST00000384121 107 ntBASIC-3.67□□□□□ -3
CHD1O14646 MTND1P29-201ENST00000448112 647 ntBASIC-3.68□□□□□ -3
CHD1O14646 AC005520.4-201ENST00000604337 90 ntBASIC-3.68□□□□□ -3
CHD1O14646 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.69□□□□□ -3
CHD1O14646 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.69□□□□□ -3
CHD1O14646 MTND3P2-201ENST00000438452 342 ntBASIC-3.69□□□□□ -3
CHD1O14646 RNU6-656P-201ENST00000516785 107 ntBASIC-3.69□□□□□ -3
CHD1O14646 MIR3170-201ENST00000582699 77 ntBASIC-3.69□□□□□ -3
CHD1O14646 U2.7-201ENST00000619197 100 ntBASIC-3.69□□□□□ -3
CHD1O14646 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.7□□□□□ -3
CHD1O14646 RNU4-14P-201ENST00000410858 122 ntBASIC-3.7□□□□□ -3
CHD1O14646 AL513043.2-201ENST00000573941 143 ntBASIC-3.7□□□□□ -3
CHD1O14646 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.7□□□□□ -3
CHD1O14646 RNU6-807P-201ENST00000516805 107 ntBASIC-3.7□□□□□ -3
CHD1O14646 AC080013.6-201ENST00000606185 215 ntBASIC-3.7□□□□□ -3
CHD1O14646 MIR429-201ENST00000362106 83 ntBASIC-3.71□□□□□ -3
CHD1O14646 MT-TW-201ENST00000387382 68 ntBASIC-3.71□□□□□ -3
CHD1O14646 AC104996.3-201ENST00000590718 94 ntBASIC-3.71□□□□□ -3
CHD1O14646 Z99129.1-201ENST00000612510 255 ntBASIC-3.71□□□□□ -3
CHD1O14646 RNU6-238P-201ENST00000363313 106 ntBASIC-3.72□□□□□ -3
CHD1O14646 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.72□□□□□ -3
CHD1O14646 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.72□□□□□ -3
CHD1O14646 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.72□□□□□ -3
CHD1O14646 AC006362.1-201ENST00000567392 174 ntBASIC-3.72□□□□□ -3
CHD1O14646 SNORD58B-201ENST00000607313 66 ntBASIC-3.72□□□□□ -3
CHD1O14646 RNU1-115P-201ENST00000365329 160 ntBASIC-3.73□□□□□ -3.01
CHD1O14646 SNORD18C-201ENST00000362704 69 ntBASIC-3.73□□□□□ -3.01
CHD1O14646 SNORD4B-201ENST00000459083 72 ntBASIC-3.73□□□□□ -3.01
CHD1O14646 SNORA18.5-201ENST00000516616 101 ntBASIC-3.73□□□□□ -3.01
CHD1O14646 AC109635.3-201ENST00000529536 185 ntBASIC-3.73□□□□□ -3.01
CHD1O14646 Y_RNA.183-201ENST00000363882 113 ntBASIC-3.74□□□□□ -3.01
CHD1O14646 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.74□□□□□ -3.01
CHD1O14646 MIR559-201ENST00000385188 96 ntBASIC-3.74□□□□□ -3.01
CHD1O14646 RNA5SP292-201ENST00000390974 118 ntBASIC-3.74□□□□□ -3.01
CHD1O14646 RNU6-247P-201ENST00000362636 107 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 RNU6-643P-201ENST00000384018 107 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 MIR548AA1-201ENST00000384971 97 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 SNORD116.3-201ENST00000517176 78 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 RNU6-508P-201ENST00000363231 103 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 Y_RNA.275-201ENST00000364726 110 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 AL731768.1-201ENST00000603124 139 ntBASIC-3.75□□□□□ -3.01
CHD1O14646 SNORD114-13-201ENST00000364377 74 ntBASIC-3.76□□□□□ -3.01
CHD1O14646 RNU6-828P-201ENST00000364876 107 ntBASIC-3.76□□□□□ -3.01
CHD1O14646 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.76□□□□□ -3.01
CHD1O14646 AC090574.1-201ENST00000623186 233 ntBASIC-3.76□□□□□ -3.01
CHD1O14646 DEFB108C-201ENST00000400154 252 ntBASIC-3.77□□□□□ -3.01
CHD1O14646 MIR548I1-201ENST00000408810 149 ntBASIC-3.77□□□□□ -3.01
CHD1O14646 RNU7-30P-201ENST00000516835 62 ntBASIC-3.77□□□□□ -3.01
CHD1O14646 RNU6-971P-201ENST00000516920 106 ntBASIC-3.77□□□□□ -3.01
CHD1O14646 SNORA63.7-201ENST00000365579 123 ntBASIC-3.78□□□□□ -3.01
CHD1O14646 SNORD90-201ENST00000391145 111 ntBASIC-3.78□□□□□ -3.01
CHD1O14646 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.78□□□□□ -3.02
CHD1O14646 RNU6-598P-201ENST00000364017 105 ntBASIC-3.78□□□□□ -3.02
CHD1O14646 SNORD2.1-201ENST00000458762 69 ntBASIC-3.78□□□□□ -3.02
CHD1O14646 SNORA27.2-201ENST00000363365 126 ntBASIC-3.79□□□□□ -3.02
CHD1O14646 RNU6-681P-201ENST00000364012 104 ntBASIC-3.79□□□□□ -3.02
CHD1O14646 RNY4P14-201ENST00000363656 96 ntBASIC-3.8□□□□□ -3.02
CHD1O14646 SNORD116-1-201ENST00000384335 95 ntBASIC-3.8□□□□□ -3.02
CHD1O14646 U2.18-201ENST00000622185 84 ntBASIC-3.8□□□□□ -3.02
CHD1O14646 MIR6844-201ENST00000637122 62 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 RNU5F-1-201ENST00000362507 117 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.81□□□□□ -3.02
CHD1O14646 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.82□□□□□ -3.02
CHD1O14646 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.82□□□□□ -3.02
CHD1O14646 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.82□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms