Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SCARNA17.3-201ENST00000516381 125 ntBASIC1.78□□□□□ -2.12
H3BM21 RNU6-419P-201ENST00000517030 63 ntBASIC1.78□□□□□ -2.12
H3BM21 MIR4490-201ENST00000582647 84 ntBASIC1.78□□□□□ -2.12
H3BM21 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.78□□□□□ -2.12
H3BM21 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
H3BM21 RNA5SP484-201ENST00000458857 111 ntBASIC1.77□□□□□ -2.13
H3BM21 AC002350.1-201ENST00000490759 375 ntBASIC1.77□□□□□ -2.13
H3BM21 RNU6-518P-201ENST00000516056 96 ntBASIC1.77□□□□□ -2.13
H3BM21 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
H3BM21 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
H3BM21 RMST_2.1-201ENST00000617263 136 ntBASIC1.77□□□□□ -2.13
H3BM21 SNORD1B-201ENST00000363091 84 ntBASIC1.76□□□□□ -2.13
H3BM21 RNU6-986P-201ENST00000363133 102 ntBASIC1.76□□□□□ -2.13
H3BM21 RNU6-716P-201ENST00000365621 103 ntBASIC1.76□□□□□ -2.13
H3BM21 RNU6-246P-201ENST00000384702 107 ntBASIC1.76□□□□□ -2.13
H3BM21 MIR652-201ENST00000385278 98 ntBASIC1.76□□□□□ -2.13
H3BM21 RNU6-269P-201ENST00000391077 97 ntBASIC1.76□□□□□ -2.13
H3BM21 RNU6-469P-201ENST00000516253 101 ntBASIC1.76□□□□□ -2.13
H3BM21 RN7SKP88-201ENST00000516847 250 ntBASIC1.76□□□□□ -2.13
H3BM21 7SK.8-201ENST00000612110 250 ntBASIC1.76□□□□□ -2.13
H3BM21 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
H3BM21 MIR8070-201ENST00000616510 88 ntBASIC1.76□□□□□ -2.13
H3BM21 7SK.13-201ENST00000622040 250 ntBASIC1.76□□□□□ -2.13
H3BM21 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
H3BM21 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
H3BM21 SNORA8.2-201ENST00000384372 139 ntBASIC1.75□□□□□ -2.13
H3BM21 MIR499A-201ENST00000384903 122 ntBASIC1.75□□□□□ -2.13
H3BM21 RNU7-90P-201ENST00000459216 62 ntBASIC1.75□□□□□ -2.13
H3BM21 SNORD13-201ENST00000459299 104 ntBASIC1.75□□□□□ -2.13
H3BM21 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
H3BM21 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
H3BM21 Y_RNA.407-201ENST00000383986 113 ntBASIC1.74□□□□□ -2.13
H3BM21 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
H3BM21 MIR548E-201ENST00000408287 88 ntBASIC1.74□□□□□ -2.13
H3BM21 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
H3BM21 U6.96-201ENST00000636425 70 ntBASIC1.74□□□□□ -2.13
H3BM21 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
H3BM21 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
H3BM21 AC090617.8-201ENST00000623339 167 ntBASIC1.72□□□□□ -2.13
H3BM21 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3BM21 RNU6-924P-201ENST00000362926 108 ntBASIC1.71□□□□□ -2.14
H3BM21 RNU6-696P-201ENST00000390834 107 ntBASIC1.71□□□□□ -2.14
H3BM21 RNU6-910P-201ENST00000390844 107 ntBASIC1.71□□□□□ -2.14
H3BM21 RNA5SP47-201ENST00000517230 109 ntBASIC1.71□□□□□ -2.14
H3BM21 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
H3BM21 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
H3BM21 SNORD18A-201ENST00000363753 72 ntBASIC1.7□□□□□ -2.14
H3BM21 MIR519A2-201ENST00000384990 87 ntBASIC1.7□□□□□ -2.14
H3BM21 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
H3BM21 MIR548AE1-201ENST00000583292 70 ntBASIC1.7□□□□□ -2.14
H3BM21 MIR489-201ENST00000384923 84 ntBASIC1.69□□□□□ -2.14
H3BM21 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
H3BM21 Y_RNA.109-201ENST00000363215 102 ntBASIC1.68□□□□□ -2.14
H3BM21 MIR516B1-201ENST00000385211 90 ntBASIC1.68□□□□□ -2.14
H3BM21 MIR1255B2-201ENST00000408618 67 ntBASIC1.68□□□□□ -2.14
H3BM21 RNU4-62P-201ENST00000410125 130 ntBASIC1.68□□□□□ -2.14
H3BM21 SNORD79.1-201ENST00000516069 84 ntBASIC1.68□□□□□ -2.14
H3BM21 MIR548AL-201ENST00000578416 97 ntBASIC1.68□□□□□ -2.14
H3BM21 MIR548AG1-201ENST00000579932 66 ntBASIC1.68□□□□□ -2.14
H3BM21 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
H3BM21 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.67□□□□□ -2.14
H3BM21 MIR4473-201ENST00000583731 91 ntBASIC1.67□□□□□ -2.14
H3BM21 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
H3BM21 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.66□□□□□ -2.14
H3BM21 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
H3BM21 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
H3BM21 AC243829.3-201ENST00000622177 108 ntBASIC1.66□□□□□ -2.14
H3BM21 AL162376.1-201ENST00000624117 175 ntBASIC1.66□□□□□ -2.14
H3BM21 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
H3BM21 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
H3BM21 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
H3BM21 SCARNA16.5-201ENST00000517114 183 ntBASIC1.65□□□□□ -2.15
H3BM21 MIR579-201ENST00000385221 98 ntBASIC1.64□□□□□ -2.15
H3BM21 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
H3BM21 AC243829.6-201ENST00000612652 106 ntBASIC1.64□□□□□ -2.15
H3BM21 U6.103-201ENST00000637085 61 ntBASIC1.64□□□□□ -2.15
H3BM21 MIR429-201ENST00000362106 83 ntBASIC1.63□□□□□ -2.15
H3BM21 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
H3BM21 U7.7-201ENST00000459276 60 ntBASIC1.63□□□□□ -2.15
H3BM21 RNU6-1206P-201ENST00000516339 103 ntBASIC1.63□□□□□ -2.15
H3BM21 RNU1-92P-201ENST00000517017 135 ntBASIC1.63□□□□□ -2.15
H3BM21 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
H3BM21 MIR3678-201ENST00000578455 94 ntBASIC1.62□□□□□ -2.15
H3BM21 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
H3BM21 RNU6-458P-201ENST00000384179 107 ntBASIC1.61□□□□□ -2.15
H3BM21 AC006210.1-201ENST00000424882 111 ntBASIC1.61□□□□□ -2.15
H3BM21 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
H3BM21 RNU7-160P-201ENST00000516660 62 ntBASIC1.61□□□□□ -2.15
H3BM21 U6.58-201ENST00000613107 107 ntBASIC1.61□□□□□ -2.15
H3BM21 Y_RNA.69-201ENST00000362885 109 ntBASIC1.6□□□□□ -2.15
H3BM21 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
H3BM21 RNU6-1204P-201ENST00000363948 107 ntBASIC1.59□□□□□ -2.15
H3BM21 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
H3BM21 RNU7-154P-201ENST00000516194 62 ntBASIC1.59□□□□□ -2.15
H3BM21 SNORD105-201ENST00000386910 85 ntBASIC1.58□□□□□ -2.16
H3BM21 SNORD110-201ENST00000408189 75 ntBASIC1.58□□□□□ -2.16
H3BM21 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
H3BM21 RNU7-151P-201ENST00000516930 53 ntBASIC1.58□□□□□ -2.16
H3BM21 SNORD115-25-201ENST00000362619 82 ntBASIC1.57□□□□□ -2.16
H3BM21 MIR329-2-201ENST00000385029 84 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms