Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.17□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-972P-201ENST00000391208 107 ntBASIC-0.17□□□□□ -2.44
TRIM49D1C9J1S8 MTATP8P2-201ENST00000435212 202 ntBASIC-0.17□□□□□ -2.44
TRIM49D1C9J1S8 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.17□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-834P-201ENST00000362367 110 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 SNORA63.2-201ENST00000362603 126 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-147P-201ENST00000383983 107 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 RNY1P7-201ENST00000384743 110 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 AL031737.1-201ENST00000450125 223 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 snoU13.13-201ENST00000458842 104 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 AP000676.1-201ENST00000533307 52 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 MIR4743-201ENST00000584576 69 ntBASIC-0.18□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-824P-201ENST00000363724 104 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 MIR329-2-201ENST00000385029 84 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 MIR548U-201ENST00000390728 81 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 MIR892B-201ENST00000401279 77 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-267P-201ENST00000516714 103 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.19□□□□□ -2.44
TRIM49D1C9J1S8 MIR148A-201ENST00000362215 68 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 SNORD116-10-201ENST00000363791 102 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 SNORD114-29-201ENST00000364819 70 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 SNORD49B-201ENST00000365172 72 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-382P-201ENST00000365181 106 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-905P-201ENST00000384434 107 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 AP001318.4-201ENST00000616637 121 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.2□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-495P-201ENST00000362995 107 ntBASIC-0.21□□□□□ -2.44
TRIM49D1C9J1S8 MIR203A-201ENST00000384836 110 ntBASIC-0.21□□□□□ -2.44
TRIM49D1C9J1S8 MIR9-2-201ENST00000384838 87 ntBASIC-0.21□□□□□ -2.44
TRIM49D1C9J1S8 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.21□□□□□ -2.44
TRIM49D1C9J1S8 RNA5SP285-201ENST00000516619 119 ntBASIC-0.21□□□□□ -2.44
TRIM49D1C9J1S8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-755P-201ENST00000364400 103 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 MIR4796-201ENST00000580742 81 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 MALAT1.1-201ENST00000618249 95 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 AC090617.8-201ENST00000623339 167 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 MIR6759-201ENST00000638110 65 ntBASIC-0.22□□□□□ -2.44
TRIM49D1C9J1S8 MIR20A-201ENST00000362279 71 ntBASIC-0.23□□□□□ -2.45
TRIM49D1C9J1S8 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
TRIM49D1C9J1S8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.23□□□□□ -2.45
TRIM49D1C9J1S8 AL035461.1-201ENST00000421490 332 ntBASIC-0.23□□□□□ -2.45
TRIM49D1C9J1S8 SNORD56B-201ENST00000384713 71 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 U3.27-201ENST00000391237 200 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 AC244090.1-201ENST00000441884 93 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 RNA5SP147-201ENST00000516493 109 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-789P-201ENST00000517105 102 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 MIR4773-1-201ENST00000637203 78 ntBASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
TRIM49D1C9J1S8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-219P-201ENST00000364728 107 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-402P-201ENST00000410678 103 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 AL445193.1-201ENST00000441183 141 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-919P-201ENST00000516731 104 ntBASIC-0.25□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-49P-201ENST00000384256 107 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 SNORD75.2-201ENST00000408784 58 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-158P-201ENST00000517104 100 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 MIR4668-201ENST00000582284 70 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 MIR5704-201ENST00000584029 77 ntBASIC-0.26□□□□□ -2.45
TRIM49D1C9J1S8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.27□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 MIR216B-201ENST00000390186 82 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 RNA5SP89-201ENST00000410300 108 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 MIR1295B-201ENST00000636144 60 ntBASIC-0.28□□□□□ -2.45
TRIM49D1C9J1S8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 MTATP6P29-201ENST00000415057 132 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 SNORA40.13-201ENST00000516379 120 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 MIR8068-201ENST00000618032 68 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 MIR4788-201ENST00000639104 80 ntBASIC-0.29□□□□□ -2.46
TRIM49D1C9J1S8 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.3□□□□□ -2.46
TRIM49D1C9J1S8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.3□□□□□ -2.46
TRIM49D1C9J1S8 RNU6-497P-201ENST00000365316 104 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms