Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 U3.27-201ENST00000391237 200 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 RNU6-162P-201ENST00000516228 103 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 CR383656.4-201ENST00000546909 122 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.12□□□□□ -2.39
SMCHD1A6NHR9 RNU6-1298P-201ENST00000362456 101 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 MIR548Z-201ENST00000584743 97 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 MALAT1.1-201ENST00000618249 95 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 RNU4-32P-201ENST00000363404 141 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP285-201ENST00000516619 119 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.11□□□□□ -2.39
SMCHD1A6NHR9 MIR1236-201ENST00000408340 102 ntBASIC0.1□□□□□ -2.39
SMCHD1A6NHR9 Y_RNA.620-201ENST00000411009 88 ntBASIC0.1□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP484-201ENST00000458857 111 ntBASIC0.1□□□□□ -2.39
SMCHD1A6NHR9 MIR3064-201ENST00000581130 66 ntBASIC0.1□□□□□ -2.39
SMCHD1A6NHR9 SNORD114-29-201ENST00000364819 70 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 Y_RNA.609-201ENST00000410669 89 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 RNU6-109P-201ENST00000516364 107 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 RNU6-184P-201ENST00000516514 107 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 AC084368.1-201ENST00000620935 65 ntBASIC0.09□□□□□ -2.39
SMCHD1A6NHR9 RNU6-294P-201ENST00000364999 102 ntBASIC0.09□□□□□ -2.4
SMCHD1A6NHR9 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
SMCHD1A6NHR9 MIR450A2-201ENST00000385022 100 ntBASIC0.09□□□□□ -2.4
SMCHD1A6NHR9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.09□□□□□ -2.4
SMCHD1A6NHR9 SNORD75.2-201ENST00000408784 58 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 SNORA18.5-201ENST00000516616 101 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 YWHAEP3-201ENST00000582767 121 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 MIR499B-201ENST00000636498 73 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 RNU6-633P-201ENST00000362612 103 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.291-201ENST00000364886 113 ntBASIC0.08□□□□□ -2.4
SMCHD1A6NHR9 RNY1P1-201ENST00000364372 112 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 RNU6-35P-201ENST00000384530 107 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 RNY1P7-201ENST00000384743 110 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 MIR145-201ENST00000384967 88 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
SMCHD1A6NHR9 RNU6-161P-201ENST00000363051 106 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 HAR1A.1-201ENST00000459583 118 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 RNU6-49P-201ENST00000384256 107 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 AC026421.1-201ENST00000519101 163 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 MIR5589-201ENST00000579442 60 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 MIR5582-201ENST00000579697 68 ntBASIC0.06□□□□□ -2.4
SMCHD1A6NHR9 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
SMCHD1A6NHR9 U7.6-201ENST00000610841 64 ntBASIC0.05□□□□□ -2.4
SMCHD1A6NHR9 MIR6509-201ENST00000614603 85 ntBASIC0.05□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNU6-267P-201ENST00000516714 103 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNU6-844P-201ENST00000517175 102 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 MIR548O2-201ENST00000616090 70 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.313-201ENST00000365095 103 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNU6-929P-201ENST00000384429 107 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNA5SP163-201ENST00000410304 99 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNA5SP227-201ENST00000516184 113 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 RNU6-180P-201ENST00000516697 61 ntBASIC0.04□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.43-201ENST00000362670 111 ntBASIC0.03□□□□□ -2.4
SMCHD1A6NHR9 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.4
SMCHD1A6NHR9 MIR4668-201ENST00000582284 70 ntBASIC0.03□□□□□ -2.4
SMCHD1A6NHR9 MIR1297-201ENST00000637311 77 ntBASIC0.03□□□□□ -2.4
SMCHD1A6NHR9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.558-201ENST00000384685 113 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 MIRLET7B-201ENST00000385140 83 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 AL691482.2-201ENST00000457453 84 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 MIR4460-201ENST00000577862 86 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 MIR3140-201ENST00000583685 90 ntBASIC0.03□□□□□ -2.41
SMCHD1A6NHR9 RNU6-274P-201ENST00000459566 107 ntBASIC0.02□□□□□ -2.41
SMCHD1A6NHR9 RNU7-188P-201ENST00000517063 64 ntBASIC0.02□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.12-201ENST00000362393 112 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU7-171P-201ENST00000459581 62 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR4636-201ENST00000582271 80 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR3657-201ENST00000584818 117 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU6-208P-201ENST00000362431 107 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 SNORD114-12-201ENST00000365400 75 ntBASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU6-815P-201ENST00000384080 113 ntBASIC0□□□□□ -2.41
SMCHD1A6NHR9 MIR203A-201ENST00000384836 110 ntBASIC0□□□□□ -2.41
SMCHD1A6NHR9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0□□□□□ -2.41
SMCHD1A6NHR9 MIR3675-201ENST00000583661 73 ntBASIC0□□□□□ -2.41
SMCHD1A6NHR9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 SNORA24B-201ENST00000384176 131 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR548E-201ENST00000408287 88 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU6-497P-201ENST00000365316 104 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR876-201ENST00000401147 81 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 MIR6086-201ENST00000638065 55 ntBASIC-0.01□□□□□ -2.41
SMCHD1A6NHR9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.02□□□□□ -2.41
SMCHD1A6NHR9 SNORD77.2-201ENST00000391045 68 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 430.7 ms