Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.46□□□□□ -2.18
NOD1Q9Y239 SNORD114-22-201ENST00000365423 72 ntBASIC1.45□□□□□ -2.18
NOD1Q9Y239 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NOD1Q9Y239 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
NOD1Q9Y239 SNORD99-201ENST00000408612 74 ntBASIC1.45□□□□□ -2.18
NOD1Q9Y239 RNU7-74P-201ENST00000459104 62 ntBASIC1.45□□□□□ -2.18
NOD1Q9Y239 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NOD1Q9Y239 Y_RNA.258-201ENST00000364613 105 ntBASIC1.44□□□□□ -2.18
NOD1Q9Y239 SNORD41.1-201ENST00000391000 69 ntBASIC1.44□□□□□ -2.18
NOD1Q9Y239 RNU6-587P-201ENST00000391282 106 ntBASIC1.44□□□□□ -2.18
NOD1Q9Y239 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
NOD1Q9Y239 RNU6-687P-201ENST00000516443 89 ntBASIC1.44□□□□□ -2.18
NOD1Q9Y239 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.44□□□□□ -2.18
NOD1Q9Y239 AC011195.1-201ENST00000578177 177 ntBASIC1.44□□□□□ -2.18
NOD1Q9Y239 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NOD1Q9Y239 RNU6-382P-201ENST00000365181 106 ntBASIC1.43□□□□□ -2.18
NOD1Q9Y239 RNU6-274P-201ENST00000459566 107 ntBASIC1.43□□□□□ -2.18
NOD1Q9Y239 RNU6-871P-201ENST00000516122 100 ntBASIC1.43□□□□□ -2.18
NOD1Q9Y239 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
NOD1Q9Y239 MIR3675-201ENST00000583661 73 ntBASIC1.43□□□□□ -2.18
NOD1Q9Y239 RNU6-726P-201ENST00000364680 107 ntBASIC1.42□□□□□ -2.18
NOD1Q9Y239 RNU6-716P-201ENST00000365621 103 ntBASIC1.42□□□□□ -2.18
NOD1Q9Y239 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NOD1Q9Y239 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
NOD1Q9Y239 SCARNA16.5-201ENST00000517114 183 ntBASIC1.41□□□□□ -2.18
NOD1Q9Y239 MIR548O2-201ENST00000616090 70 ntBASIC1.41□□□□□ -2.18
NOD1Q9Y239 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
NOD1Q9Y239 RNU6-1241P-201ENST00000384536 107 ntBASIC1.4□□□□□ -2.19
NOD1Q9Y239 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
NOD1Q9Y239 MIR154-201ENST00000385243 84 ntBASIC1.4□□□□□ -2.19
NOD1Q9Y239 AC114801.3-201ENST00000510231 177 ntBASIC1.4□□□□□ -2.19
NOD1Q9Y239 MIR18A-201ENST00000362310 71 ntBASIC1.39□□□□□ -2.19
NOD1Q9Y239 AC244098.3-201ENST00000424803 96 ntBASIC1.39□□□□□ -2.19
NOD1Q9Y239 RNU6-634P-201ENST00000459134 106 ntBASIC1.39□□□□□ -2.19
NOD1Q9Y239 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.39□□□□□ -2.19
NOD1Q9Y239 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
NOD1Q9Y239 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
NOD1Q9Y239 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
NOD1Q9Y239 SNORD75.2-201ENST00000408784 58 ntBASIC1.37□□□□□ -2.19
NOD1Q9Y239 RNU6-495P-201ENST00000362995 107 ntBASIC1.36□□□□□ -2.19
NOD1Q9Y239 RNU6-54P-201ENST00000365563 107 ntBASIC1.36□□□□□ -2.19
NOD1Q9Y239 AL691482.2-201ENST00000457453 84 ntBASIC1.36□□□□□ -2.19
NOD1Q9Y239 RNU6-752P-201ENST00000516376 102 ntBASIC1.36□□□□□ -2.19
NOD1Q9Y239 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.36□□□□□ -2.19
NOD1Q9Y239 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.36□□□□□ -2.19
NOD1Q9Y239 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.35□□□□□ -2.19
NOD1Q9Y239 RNU6V-201ENST00000384105 107 ntBASIC1.35□□□□□ -2.19
NOD1Q9Y239 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
NOD1Q9Y239 AC093423.1-201ENST00000440817 142 ntBASIC1.35□□□□□ -2.19
NOD1Q9Y239 RNU7-24P-201ENST00000458867 62 ntBASIC1.35□□□□□ -2.19
NOD1Q9Y239 NAMPTP3-201ENST00000569273 224 ntBASIC1.35□□□□□ -2.19
NOD1Q9Y239 RNU4-45P-201ENST00000365469 141 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 RNU6-269P-201ENST00000391077 97 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 MIR4460-201ENST00000577862 86 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 MIR4295-201ENST00000585286 85 ntBASIC1.34□□□□□ -2.19
NOD1Q9Y239 SNORD45.1-201ENST00000363181 77 ntBASIC1.33□□□□□ -2.2
NOD1Q9Y239 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
NOD1Q9Y239 RNA5SP227-201ENST00000516184 113 ntBASIC1.33□□□□□ -2.2
NOD1Q9Y239 MIR6828-201ENST00000636181 60 ntBASIC1.33□□□□□ -2.2
NOD1Q9Y239 RNU1-141P-201ENST00000364623 158 ntBASIC1.32□□□□□ -2.2
NOD1Q9Y239 MIR520E-201ENST00000384867 87 ntBASIC1.32□□□□□ -2.2
NOD1Q9Y239 MT-TY-201ENST00000387409 66 ntBASIC1.32□□□□□ -2.2
NOD1Q9Y239 RNU1-93P-201ENST00000364704 169 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 SNORD115-31-201ENST00000365318 82 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 SNORA8.2-201ENST00000384372 139 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 AL353765.1-201ENST00000605514 183 ntBASIC1.31□□□□□ -2.2
NOD1Q9Y239 SNORA36.1-201ENST00000363424 132 ntBASIC1.3□□□□□ -2.2
NOD1Q9Y239 MIR4661-201ENST00000582720 75 ntBASIC1.3□□□□□ -2.2
NOD1Q9Y239 AL162376.1-201ENST00000624117 175 ntBASIC1.3□□□□□ -2.2
NOD1Q9Y239 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNU6-1039P-201ENST00000383931 107 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNU6-788P-201ENST00000390967 104 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNU6-539P-201ENST00000516665 103 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNA5SP268-201ENST00000516828 124 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNA5SP94-201ENST00000516917 108 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 MIR8053-201ENST00000613344 75 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 MIR6509-201ENST00000614603 85 ntBASIC1.29□□□□□ -2.2
NOD1Q9Y239 RNU6-540P-201ENST00000384622 101 ntBASIC1.28□□□□□ -2.2
NOD1Q9Y239 RNA5SP484-201ENST00000458857 111 ntBASIC1.28□□□□□ -2.2
NOD1Q9Y239 RNU6-649P-201ENST00000384463 107 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 SNORD45A-201ENST00000384512 84 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 SNORD30.1-201ENST00000391309 70 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.27□□□□□ -2.21
NOD1Q9Y239 SNORD42B-201ENST00000458893 67 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 MIR6515-201ENST00000619843 57 ntBASIC1.27□□□□□ -2.21
NOD1Q9Y239 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
NOD1Q9Y239 RNU6-604P-201ENST00000390917 100 ntBASIC1.26□□□□□ -2.21
NOD1Q9Y239 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
NOD1Q9Y239 SNORD115-22-201ENST00000364456 82 ntBASIC1.25□□□□□ -2.21
NOD1Q9Y239 RNU6-895P-201ENST00000384125 103 ntBASIC1.25□□□□□ -2.21
NOD1Q9Y239 MIR203A-201ENST00000384836 110 ntBASIC1.25□□□□□ -2.21
NOD1Q9Y239 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.25□□□□□ -2.21
NOD1Q9Y239 RNU5B-6P-201ENST00000516765 68 ntBASIC1.25□□□□□ -2.21
NOD1Q9Y239 RNU6-1223P-201ENST00000517124 104 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms