Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-1015P-201ENST00000517121 99 ntBASIC1.32□□□□□ -2.2
CNTN3Q9P232 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
CNTN3Q9P232 RNU6-274P-201ENST00000459566 107 ntBASIC1.31□□□□□ -2.2
CNTN3Q9P232 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.31□□□□□ -2.2
CNTN3Q9P232 RNU7-24P-201ENST00000458867 62 ntBASIC1.3□□□□□ -2.2
CNTN3Q9P232 AC114801.3-201ENST00000510231 177 ntBASIC1.3□□□□□ -2.2
CNTN3Q9P232 AL078603.1-201ENST00000603824 313 ntBASIC1.3□□□□□ -2.2
CNTN3Q9P232 MIR548O2-201ENST00000616090 70 ntBASIC1.3□□□□□ -2.2
CNTN3Q9P232 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
CNTN3Q9P232 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CNTN3Q9P232 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CNTN3Q9P232 RNU6-726P-201ENST00000364680 107 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 RNU6-1335P-201ENST00000365426 107 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 RNU6-634P-201ENST00000459134 106 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 SCARNA16.5-201ENST00000517114 183 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 MIR8070-201ENST00000616510 88 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 MIR4773-1-201ENST00000637203 78 ntBASIC1.29□□□□□ -2.2
CNTN3Q9P232 RNU6-330P-201ENST00000363015 107 ntBASIC1.28□□□□□ -2.2
CNTN3Q9P232 SNORD75.2-201ENST00000408784 58 ntBASIC1.28□□□□□ -2.2
CNTN3Q9P232 RNU6-382P-201ENST00000365181 106 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 MIR154-201ENST00000385243 84 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 SNORD99-201ENST00000408612 74 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 MIR664A-201ENST00000626086 82 ntBASIC1.27□□□□□ -2.21
CNTN3Q9P232 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CNTN3Q9P232 RNU6-495P-201ENST00000362995 107 ntBASIC1.26□□□□□ -2.21
CNTN3Q9P232 RNU6-1241P-201ENST00000384536 107 ntBASIC1.26□□□□□ -2.21
CNTN3Q9P232 AC011195.1-201ENST00000578177 177 ntBASIC1.26□□□□□ -2.21
CNTN3Q9P232 MIR6828-201ENST00000636181 60 ntBASIC1.26□□□□□ -2.21
CNTN3Q9P232 MIR18A-201ENST00000362310 71 ntBASIC1.25□□□□□ -2.21
CNTN3Q9P232 Y_RNA.258-201ENST00000364613 105 ntBASIC1.25□□□□□ -2.21
CNTN3Q9P232 RNU6-788P-201ENST00000390967 104 ntBASIC1.25□□□□□ -2.21
CNTN3Q9P232 AC093423.1-201ENST00000440817 142 ntBASIC1.25□□□□□ -2.21
CNTN3Q9P232 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.25□□□□□ -2.21
CNTN3Q9P232 SNORA8.2-201ENST00000384372 139 ntBASIC1.24□□□□□ -2.21
CNTN3Q9P232 AC244098.3-201ENST00000424803 96 ntBASIC1.24□□□□□ -2.21
CNTN3Q9P232 MIR8053-201ENST00000613344 75 ntBASIC1.24□□□□□ -2.21
CNTN3Q9P232 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
CNTN3Q9P232 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
CNTN3Q9P232 AL691482.2-201ENST00000457453 84 ntBASIC1.23□□□□□ -2.21
CNTN3Q9P232 RNU6-539P-201ENST00000516665 103 ntBASIC1.23□□□□□ -2.21
CNTN3Q9P232 RNU6-590P-201ENST00000365039 107 ntBASIC1.22□□□□□ -2.21
CNTN3Q9P232 MT-TY-201ENST00000387409 66 ntBASIC1.22□□□□□ -2.21
CNTN3Q9P232 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
CNTN3Q9P232 MIR4460-201ENST00000577862 86 ntBASIC1.22□□□□□ -2.21
CNTN3Q9P232 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CNTN3Q9P232 RNU1-141P-201ENST00000364623 158 ntBASIC1.21□□□□□ -2.22
CNTN3Q9P232 SNORD45.1-201ENST00000363181 77 ntBASIC1.2□□□□□ -2.22
CNTN3Q9P232 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
CNTN3Q9P232 Y_RNA.226-201ENST00000364337 114 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 RNU6V-201ENST00000384105 107 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 RNU6-269P-201ENST00000391077 97 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 RNA5SP227-201ENST00000516184 113 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 AL353765.1-201ENST00000605514 183 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 AL162376.1-201ENST00000624117 175 ntBASIC1.19□□□□□ -2.22
CNTN3Q9P232 RNU6-1039P-201ENST00000383931 107 ntBASIC1.18□□□□□ -2.22
CNTN3Q9P232 RNU6-649P-201ENST00000384463 107 ntBASIC1.18□□□□□ -2.22
CNTN3Q9P232 RNA5SP247-201ENST00000411181 105 ntBASIC1.18□□□□□ -2.22
CNTN3Q9P232 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.18□□□□□ -2.22
CNTN3Q9P232 RNU6-54P-201ENST00000365563 107 ntBASIC1.17□□□□□ -2.22
CNTN3Q9P232 MIR499A-201ENST00000384903 122 ntBASIC1.17□□□□□ -2.22
CNTN3Q9P232 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
CNTN3Q9P232 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
CNTN3Q9P232 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.17□□□□□ -2.22
CNTN3Q9P232 RNA5SP268-201ENST00000516828 124 ntBASIC1.17□□□□□ -2.22
CNTN3Q9P232 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 RNA5SP94-201ENST00000516917 108 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 NAMPTP3-201ENST00000569273 224 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 MIR6509-201ENST00000614603 85 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 AC069503.3-201ENST00000618674 145 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 AC073869.9-201ENST00000641610 120 ntBASIC1.16□□□□□ -2.22
CNTN3Q9P232 SNORD114-4-201ENST00000363962 75 ntBASIC1.15□□□□□ -2.23
CNTN3Q9P232 RNU6-895P-201ENST00000384125 103 ntBASIC1.15□□□□□ -2.23
CNTN3Q9P232 RNU6-540P-201ENST00000384622 101 ntBASIC1.15□□□□□ -2.23
CNTN3Q9P232 SNORD30.1-201ENST00000391309 70 ntBASIC1.15□□□□□ -2.23
CNTN3Q9P232 RNA5SP222-201ENST00000411039 105 ntBASIC1.15□□□□□ -2.23
CNTN3Q9P232 SNORA36.1-201ENST00000363424 132 ntBASIC1.14□□□□□ -2.23
CNTN3Q9P232 SNORD115-31-201ENST00000365318 82 ntBASIC1.14□□□□□ -2.23
CNTN3Q9P232 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
CNTN3Q9P232 SNORD115-22-201ENST00000364456 82 ntBASIC1.13□□□□□ -2.23
CNTN3Q9P232 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
CNTN3Q9P232 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
CNTN3Q9P232 MIR6767-201ENST00000637302 66 ntBASIC1.13□□□□□ -2.23
CNTN3Q9P232 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
CNTN3Q9P232 RNU1-93P-201ENST00000364704 169 ntBASIC1.12□□□□□ -2.23
CNTN3Q9P232 RNU6-663P-201ENST00000391105 106 ntBASIC1.12□□□□□ -2.23
CNTN3Q9P232 RNU6-260P-201ENST00000384092 107 ntBASIC1.11□□□□□ -2.23
CNTN3Q9P232 MIR7-2-201ENST00000384970 110 ntBASIC1.11□□□□□ -2.23
CNTN3Q9P232 RNA5SP484-201ENST00000458857 111 ntBASIC1.11□□□□□ -2.23
CNTN3Q9P232 SNORD42B-201ENST00000458893 67 ntBASIC1.11□□□□□ -2.23
CNTN3Q9P232 RNU6-881P-201ENST00000516813 102 ntBASIC1.11□□□□□ -2.23
CNTN3Q9P232 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CNTN3Q9P232 SNORD45A-201ENST00000384512 84 ntBASIC1.1□□□□□ -2.23
CNTN3Q9P232 MIR608-201ENST00000384820 100 ntBASIC1.1□□□□□ -2.23
CNTN3Q9P232 RNU6-604P-201ENST00000390917 100 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms