Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 YWHAEP3-201ENST00000582767 121 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 SNORA63-201ENST00000363450 132 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 RNY4P6-201ENST00000363667 96 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 MIR203A-201ENST00000384836 110 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 MTATP6P29-201ENST00000415057 132 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 RNU7-24P-201ENST00000458867 62 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 SNORD42B-201ENST00000458893 67 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 MIR3144-201ENST00000579460 79 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 AC145423.2-201ENST00000610631 239 ntBASIC-0.46□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 RNU4-11P-201ENST00000365287 132 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 RNU6-54P-201ENST00000365563 107 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 MIR518B-201ENST00000385127 83 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 MIR204-201ENST00000385200 110 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 AP000533.3-201ENST00000447704 118 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 MIR6739-201ENST00000622461 75 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 AC090617.8-201ENST00000623339 167 ntBASIC-0.47□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 RNU6-426P-201ENST00000516464 97 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 MIR5704-201ENST00000584029 77 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 AC025166.1-201ENST00000612411 163 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 MIR6773-201ENST00000612812 74 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 AC004792.1-201ENST00000614523 137 ntBASIC-0.47□□□□□ -2.49
CCDC88CQ9P219 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 RNU6-480P-201ENST00000384332 107 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 MT-TG-201ENST00000387429 68 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 RNU6-65P-201ENST00000516332 98 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 CYP3A54P-201ENST00000566950 75 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 MIR4503-201ENST00000582187 83 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 AP001340.1-201ENST00000624405 217 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 RNU6-394P-201ENST00000410735 107 ntBASIC-0.48□□□□□ -2.49
CCDC88CQ9P219 SNORD114-25-201ENST00000363742 72 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 RNA5SP292-201ENST00000390974 118 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 MIR1302-3-201ENST00000408128 138 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 RNU6-935P-201ENST00000410371 100 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 SNORA7.5-201ENST00000410672 110 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 SNORD4B-201ENST00000459083 72 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 RNU6-881P-201ENST00000516813 102 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 RNU6-762P-201ENST00000517107 102 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 MIR3140-201ENST00000583685 90 ntBASIC-0.49□□□□□ -2.49
CCDC88CQ9P219 SNORA63.2-201ENST00000362603 126 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 RNU6-260P-201ENST00000384092 107 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 SNORD37.2-201ENST00000391075 66 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 MIR582-201ENST00000365731 98 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 SNORD58A-201ENST00000383875 65 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 RNU6-196P-201ENST00000384315 107 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 RNU6-466P-201ENST00000391224 103 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 U3.27-201ENST00000391237 200 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 RNU7-120P-201ENST00000459334 63 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 RNU6-138P-201ENST00000515952 107 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 MIR6509-201ENST00000614603 85 ntBASIC-0.5□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 RNU6-694P-201ENST00000364071 147 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 RNU6-915P-201ENST00000364943 103 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 AL445193.1-201ENST00000441183 141 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 MTND5P41-201ENST00000517498 206 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 U7.2-201ENST00000607576 63 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 snoR1.1-201ENST00000628177 80 ntBASIC-0.51□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 SNORA19.1-201ENST00000410656 129 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 SNORA13-201ENST00000458790 133 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 RNU4-36P-201ENST00000364294 144 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 AC022137.1-201ENST00000483735 151 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 MIR4679-2-201ENST00000578358 77 ntBASIC-0.52□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 MIR517B-201ENST00000385102 67 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 SNORD64-201ENST00000386683 67 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 MTND4LP9-201ENST00000427694 174 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms