Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 SNORA75.1-201ENST00000391130 148 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 RNU7-40P-201ENST00000516397 64 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 SNORA40.17-201ENST00000517256 115 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 MIR548AG2-201ENST00000581228 64 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 MIR6509-201ENST00000614603 85 ntBASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LMCD1Q9NZU5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 RNU6-364P-201ENST00000384387 107 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 RNU6-535P-201ENST00000384722 107 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 MIR203A-201ENST00000384836 110 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 RPS26P5-201ENST00000418544 335 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 AC244505.6-201ENST00000452829 130 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 MIR4676-201ENST00000583078 72 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 MIR3657-201ENST00000584818 117 ntBASIC1.62□□□□□ -2.15
LMCD1Q9NZU5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.61□□□□□ -2.15
LMCD1Q9NZU5 MIR6078-201ENST00000611069 100 ntBASIC1.61□□□□□ -2.15
LMCD1Q9NZU5 AC022709.1-201ENST00000615967 87 ntBASIC1.61□□□□□ -2.15
LMCD1Q9NZU5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
LMCD1Q9NZU5 SNORD60.1-201ENST00000362451 73 ntBASIC1.6□□□□□ -2.15
LMCD1Q9NZU5 SNORD115-44-201ENST00000365391 82 ntBASIC1.6□□□□□ -2.15
LMCD1Q9NZU5 SNORD111-201ENST00000408139 94 ntBASIC1.6□□□□□ -2.15
LMCD1Q9NZU5 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
LMCD1Q9NZU5 RNA5SP215-201ENST00000363440 122 ntBASIC1.59□□□□□ -2.15
LMCD1Q9NZU5 RNU6-656P-201ENST00000516785 107 ntBASIC1.59□□□□□ -2.15
LMCD1Q9NZU5 RNU6-92P-201ENST00000605893 104 ntBASIC1.59□□□□□ -2.15
LMCD1Q9NZU5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
LMCD1Q9NZU5 RNU6-1312P-201ENST00000362425 108 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 RNU6-54P-201ENST00000365563 107 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 RNU6-1126P-201ENST00000384002 107 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 MIR150-201ENST00000385048 84 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 RNU7-102P-201ENST00000458948 62 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LMCD1Q9NZU5 Y_RNA.379-201ENST00000365653 102 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 RNU6-910P-201ENST00000390844 107 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 MIR938-201ENST00000401216 83 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 RNU6-994P-201ENST00000410507 111 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 AL591704.2-201ENST00000421658 181 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 SNORD42B-201ENST00000458893 67 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 AC008608.1-201ENST00000603910 127 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 MIR548O2-201ENST00000616090 70 ntBASIC1.57□□□□□ -2.16
LMCD1Q9NZU5 RNU7-21P-201ENST00000459430 62 ntBASIC1.56□□□□□ -2.16
LMCD1Q9NZU5 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
LMCD1Q9NZU5 MIR6515-201ENST00000619843 57 ntBASIC1.56□□□□□ -2.16
LMCD1Q9NZU5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LMCD1Q9NZU5 RNA5SP403-201ENST00000363598 108 ntBASIC1.55□□□□□ -2.16
LMCD1Q9NZU5 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
LMCD1Q9NZU5 RNU7-13P-201ENST00000516413 62 ntBASIC1.55□□□□□ -2.16
LMCD1Q9NZU5 RNU6-1089P-201ENST00000516473 104 ntBASIC1.55□□□□□ -2.16
LMCD1Q9NZU5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 SNORA2.1-201ENST00000363089 137 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 RNU1-93P-201ENST00000364704 169 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 MIR100-201ENST00000385259 80 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 MIR4804-201ENST00000581683 73 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 MIR6739-201ENST00000622461 75 ntBASIC1.54□□□□□ -2.16
LMCD1Q9NZU5 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
LMCD1Q9NZU5 RNU6-990P-201ENST00000364385 104 ntBASIC1.53□□□□□ -2.16
LMCD1Q9NZU5 RNU6-260P-201ENST00000384092 107 ntBASIC1.53□□□□□ -2.16
LMCD1Q9NZU5 SNORA80D-201ENST00000384488 135 ntBASIC1.53□□□□□ -2.16
LMCD1Q9NZU5 MIR519E-201ENST00000385075 84 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 MIR216B-201ENST00000390186 82 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 RNU7-56P-201ENST00000458744 62 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 RNU7-90P-201ENST00000459216 62 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 RNU7-161P-201ENST00000517289 62 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 MIR548AD-201ENST00000584780 82 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 MIR6779-201ENST00000617283 64 ntBASIC1.52□□□□□ -2.17
LMCD1Q9NZU5 RNU6-753P-201ENST00000363926 107 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 RNU6-302P-201ENST00000365249 107 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 MIR617-201ENST00000385030 97 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 RNU1-119P-201ENST00000391122 165 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 RNU6-1223P-201ENST00000517124 104 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 MIR548V-201ENST00000584165 80 ntBASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
LMCD1Q9NZU5 MIR1-1-201ENST00000362147 71 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 MIR520F-201ENST00000384824 87 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 AL157398.1-201ENST00000452981 186 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 RNA5SP147-201ENST00000516493 109 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 RNU6-980P-201ENST00000516925 103 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.5□□□□□ -2.17
LMCD1Q9NZU5 RNU6V-201ENST00000384105 107 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 MIR630-201ENST00000384957 97 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 SNORD79.1-201ENST00000516069 84 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 SNORA31.14-201ENST00000516728 116 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 uc_338.16-201ENST00000621804 95 ntBASIC1.49□□□□□ -2.17
LMCD1Q9NZU5 SNORD115-24-201ENST00000363528 82 ntBASIC1.48□□□□□ -2.17
LMCD1Q9NZU5 RNU6-35P-201ENST00000384530 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms