Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR4536-1-201ENST00000583537 88 ntBASIC0.12□□□□□ -2.39
NDE1Q9NXR1 MIR4473-201ENST00000583731 91 ntBASIC0.12□□□□□ -2.39
NDE1Q9NXR1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.12□□□□□ -2.39
NDE1Q9NXR1 MIR6759-201ENST00000638110 65 ntBASIC0.12□□□□□ -2.39
NDE1Q9NXR1 AC093423.1-201ENST00000440817 142 ntBASIC0.11□□□□□ -2.39
NDE1Q9NXR1 RNU6-162P-201ENST00000516228 103 ntBASIC0.11□□□□□ -2.39
NDE1Q9NXR1 Y_RNA.705-201ENST00000516862 110 ntBASIC0.11□□□□□ -2.39
NDE1Q9NXR1 MIR4636-201ENST00000582271 80 ntBASIC0.11□□□□□ -2.39
NDE1Q9NXR1 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
NDE1Q9NXR1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
NDE1Q9NXR1 RNU6-766P-201ENST00000362478 107 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 Y_RNA.107-201ENST00000363190 121 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 Y_RNA.291-201ENST00000364886 113 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 AL031737.1-201ENST00000450125 223 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 MIR4460-201ENST00000577862 86 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 YWHAEP2-201ENST00000580066 112 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 MIR4677-201ENST00000584153 80 ntBASIC0.1□□□□□ -2.39
NDE1Q9NXR1 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNU6-215P-201ENST00000365169 102 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNU6-132P-201ENST00000383863 107 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNU6-887P-201ENST00000410660 100 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 MIR5589-201ENST00000579442 60 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 MIR548AD-201ENST00000584780 82 ntBASIC0.09□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 SNORD58A-201ENST00000383875 65 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR451A-201ENST00000385059 72 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 RNU6-972P-201ENST00000391208 107 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 RNU6-519P-201ENST00000410590 108 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 RNU6-1057P-201ENST00000517162 102 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR548AI-201ENST00000579940 88 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR3925-201ENST00000584674 77 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 U7.6-201ENST00000610841 64 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
NDE1Q9NXR1 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.239-201ENST00000364444 113 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 RNU6-935P-201ENST00000410371 100 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 SNORD4B-201ENST00000459083 72 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 SNORA25.13-201ENST00000516395 103 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 MIR4802-201ENST00000581881 80 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.818-201ENST00000618813 71 ntBASIC0.07□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.93-201ENST00000363066 109 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 MIR548AE1-201ENST00000583292 70 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 U7.3-201ENST00000616123 62 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 AC069503.3-201ENST00000618674 145 ntBASIC0.06□□□□□ -2.4
NDE1Q9NXR1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU6-44P-201ENST00000384045 107 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 MIR516B1-201ENST00000385211 90 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 MT-TY-201ENST00000387409 66 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU6-1052P-201ENST00000411398 104 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 FGF7P7-201ENST00000514120 227 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU6-719P-201ENST00000516671 104 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU6-919P-201ENST00000516731 104 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 RNU6-782P-201ENST00000516852 104 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 AC026421.1-201ENST00000519101 163 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 MIR3064-201ENST00000581130 66 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.05□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.190-201ENST00000363964 101 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 RNU6V-201ENST00000384105 107 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 MIR145-201ENST00000384967 88 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.609-201ENST00000410669 89 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.96-201ENST00000363092 109 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 RNU4-32P-201ENST00000363404 141 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 SNORD116-10-201ENST00000363791 102 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 RNU6-755P-201ENST00000364400 103 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 Y_RNA.544-201ENST00000384650 113 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 RNA5SP292-201ENST00000390974 118 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 AL035461.1-201ENST00000421490 332 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 AC104996.3-201ENST00000590718 94 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.03□□□□□ -2.4
NDE1Q9NXR1 AC084368.1-201ENST00000620935 65 ntBASIC0.03□□□□□ -2.4
NDE1Q9NXR1 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 Y_RNA.290-201ENST00000364879 114 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 RNU6-811P-201ENST00000384069 107 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 MTATP8P2-201ENST00000435212 202 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 MIR3140-201ENST00000583685 90 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.02□□□□□ -2.41
NDE1Q9NXR1 RNA5SP98-201ENST00000363158 137 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 RNU6-54P-201ENST00000365563 107 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 RNU6-147P-201ENST00000383983 107 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 Y_RNA.491-201ENST00000384417 107 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 MIR106A-201ENST00000384870 81 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 MIR548U-201ENST00000390728 81 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 RNU7-188P-201ENST00000517063 64 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 RNU6-762P-201ENST00000517107 102 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
NDE1Q9NXR1 MIR548O2-201ENST00000616090 70 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms