Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNA5SP285-201ENST00000516619 119 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-762P-201ENST00000517107 102 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 AL513043.2-201ENST00000573941 143 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR20A-201ENST00000362279 71 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR224-201ENST00000384889 81 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR548A3-201ENST00000385297 97 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR216B-201ENST00000390186 82 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-65P-201ENST00000516332 98 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR5009-201ENST00000578736 100 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR4536-1-201ENST00000583537 88 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 MIR4263-201ENST00000584745 83 ntBASIC-0.45□□□□□ -2.48
EXOSC3Q9NQT5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.46□□□□□ -2.48
EXOSC3Q9NQT5 SNORD50.2-201ENST00000365465 70 ntBASIC-0.46□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-54P-201ENST00000365563 107 ntBASIC-0.46□□□□□ -2.48
EXOSC3Q9NQT5 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-659P-201ENST00000516454 104 ntBASIC-0.46□□□□□ -2.48
EXOSC3Q9NQT5 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 MIR196A1-201ENST00000388006 70 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 AC244090.1-201ENST00000441884 93 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 RNU7-85P-201ENST00000458851 63 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-719P-201ENST00000516671 104 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 U6.95-201ENST00000636931 70 ntBASIC-0.47□□□□□ -2.48
EXOSC3Q9NQT5 SNORD45B-201ENST00000364617 72 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-209P-201ENST00000384118 107 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 MIR5589-201ENST00000579442 60 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 AC103810.7-201ENST00000607821 91 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.48□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 RNA5SP368-201ENST00000364298 116 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 MIR604-201ENST00000384880 94 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 AL500527.2-201ENST00000454105 95 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 FGF7P7-201ENST00000514120 227 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 SCARNA17-201ENST00000516183 144 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 AP000676.1-201ENST00000533307 52 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 MIR4493-201ENST00000584016 73 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 MIR6759-201ENST00000638110 65 ntBASIC-0.49□□□□□ -2.49
EXOSC3Q9NQT5 RNY1P7-201ENST00000384743 110 ntBASIC-0.5□□□□□ -2.49
EXOSC3Q9NQT5 MIR3671-201ENST00000580455 88 ntBASIC-0.5□□□□□ -2.49
EXOSC3Q9NQT5 MIR4802-201ENST00000581881 80 ntBASIC-0.5□□□□□ -2.49
EXOSC3Q9NQT5 MIR4439-201ENST00000583746 80 ntBASIC-0.5□□□□□ -2.49
EXOSC3Q9NQT5 MIR548Z-201ENST00000584743 97 ntBASIC-0.5□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-774P-201ENST00000363238 107 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-132P-201ENST00000383863 107 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-813P-201ENST00000384691 107 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 MIR3133-201ENST00000583157 78 ntBASIC-0.51□□□□□ -2.49
EXOSC3Q9NQT5 MT-TQ-201ENST00000387372 72 ntBASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 U3.27-201ENST00000391237 200 ntBASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-795P-201ENST00000516323 103 ntBASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 MIR4280-201ENST00000582178 76 ntBASIC-0.52□□□□□ -2.49
EXOSC3Q9NQT5 RNA5SP257-201ENST00000363023 116 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 MIR582-201ENST00000365731 98 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 MIR9-2-201ENST00000384838 87 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 SNORA49-201ENST00000386157 136 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-644P-201ENST00000391155 98 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 MIR548I1-201ENST00000408810 149 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 MIR3668-201ENST00000582138 75 ntBASIC-0.53□□□□□ -2.49
EXOSC3Q9NQT5 RNU4-36P-201ENST00000364294 144 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SNORD116-14-201ENST00000383894 92 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SNORD116-17-201ENST00000383929 92 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SNORD116-15-201ENST00000384445 92 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SNORD116-19-201ENST00000384729 92 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SNORD42B-201ENST00000458893 67 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 MIR4777-201ENST00000583710 86 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 AC012531.4-201ENST00000616509 177 ntBASIC-0.54□□□□□ -2.5
EXOSC3Q9NQT5 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 SNORD56B-201ENST00000384713 71 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-721P-201ENST00000410155 105 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 AC097510.1-201ENST00000510945 133 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 AC108676.2-201ENST00000605225 163 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 AC093726.3-201ENST00000637588 150 ntBASIC-0.55□□□□□ -2.5
EXOSC3Q9NQT5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 SNORD116-21-201ENST00000384507 92 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms