Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 SNORA32.1-201ENST00000364514 115 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 U3.27-201ENST00000391237 200 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 SNORD4B-201ENST00000459083 72 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 RNU6-537P-201ENST00000517277 103 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 MIR3910-1-201ENST00000580936 111 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 MIR6507-201ENST00000613630 70 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 MIR6129-201ENST00000616087 109 ntBASIC-0.3□□□□□ -2.46
CHMP1AQ9HD42 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
CHMP1AQ9HD42 MIR1273G-201ENST00000577677 100 ntBASIC-0.31□□□□□ -2.46
CHMP1AQ9HD42 SNORD114-12-201ENST00000365400 75 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 RNU6-54P-201ENST00000365563 107 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 MIR590-201ENST00000385008 97 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 SNORD4A-201ENST00000459174 72 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 RNU6-62P-201ENST00000516526 102 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 MIR3064-201ENST00000581130 66 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 MIR8087-201ENST00000612745 78 ntBASIC-0.32□□□□□ -2.46
CHMP1AQ9HD42 MIR20A-201ENST00000362279 71 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 RNU6-106P-201ENST00000384405 107 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 MIR1302-5-201ENST00000408164 150 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 RNU6-554P-201ENST00000410466 106 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 AC244250.2-201ENST00000418731 148 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 RNU6-719P-201ENST00000516671 104 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.33□□□□□ -2.46
CHMP1AQ9HD42 MIR655-201ENST00000362159 97 ntBASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 SNORD49B-201ENST00000365172 72 ntBASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 FGF7P7-201ENST00000514120 227 ntBASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 RNU6-589P-201ENST00000516485 107 ntBASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 AC132825.6-201ENST00000638861 357 ntBASIC-0.34□□□□□ -2.46
CHMP1AQ9HD42 RNU6-834P-201ENST00000362367 110 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNA5SP98-201ENST00000363158 137 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 SNORD58A-201ENST00000383875 65 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 SNORA19-201ENST00000384737 128 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNU6-972P-201ENST00000391208 107 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 MIR1197-201ENST00000408818 88 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNU6-519P-201ENST00000410590 108 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 AC244090.1-201ENST00000441884 93 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNU6-479P-201ENST00000516348 105 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 AC104996.3-201ENST00000590718 94 ntBASIC-0.35□□□□□ -2.47
CHMP1AQ9HD42 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 MIR548U-201ENST00000390728 81 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 RNU6-887P-201ENST00000410660 100 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 RNU6-762P-201ENST00000517107 102 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
CHMP1AQ9HD42 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.37□□□□□ -2.47
CHMP1AQ9HD42 MIR3140-201ENST00000583685 90 ntBASIC-0.37□□□□□ -2.47
CHMP1AQ9HD42 SNORA63.2-201ENST00000362603 126 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 RNU6-302P-201ENST00000365249 107 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 RNU6-811P-201ENST00000384069 107 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 SNORD42B-201ENST00000458893 67 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 RNU6-313P-201ENST00000516317 112 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 RNU6-109P-201ENST00000516364 107 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 RNU6-184P-201ENST00000516514 107 ntBASIC-0.38□□□□□ -2.47
CHMP1AQ9HD42 SNORD113-1-201ENST00000365321 69 ntBASIC-0.39□□□□□ -2.47
CHMP1AQ9HD42 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.39□□□□□ -2.47
CHMP1AQ9HD42 RNA5SP292-201ENST00000390974 118 ntBASIC-0.39□□□□□ -2.47
CHMP1AQ9HD42 MIR3666-201ENST00000607845 111 ntBASIC-0.39□□□□□ -2.47
CHMP1AQ9HD42 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.4□□□□□ -2.47
CHMP1AQ9HD42 RNU7-61P-201ENST00000515897 61 ntBASIC-0.4□□□□□ -2.47
CHMP1AQ9HD42 MIR582-201ENST00000365731 98 ntBASIC-0.41□□□□□ -2.48
CHMP1AQ9HD42 SNORA24B-201ENST00000384176 131 ntBASIC-0.41□□□□□ -2.48
CHMP1AQ9HD42 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.41□□□□□ -2.48
CHMP1AQ9HD42 SNORA49-201ENST00000386157 136 ntBASIC-0.41□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 SNORD90-201ENST00000391145 111 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 AL603908.1-201ENST00000406098 201 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 AC026421.1-201ENST00000519101 163 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.42□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.43□□□□□ -2.48
CHMP1AQ9HD42 RNU2-51P-201ENST00000410708 197 ntBASIC-0.43□□□□□ -2.48
CHMP1AQ9HD42 SNORA18.5-201ENST00000516616 101 ntBASIC-0.43□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 SNORD116-10-201ENST00000363791 102 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 SNORD114-4-201ENST00000363962 75 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 MIR548E-201ENST00000408287 88 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 AC145423.2-201ENST00000610631 239 ntBASIC-0.44□□□□□ -2.48
CHMP1AQ9HD42 RNU6-766P-201ENST00000362478 107 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 RNU6-495P-201ENST00000362995 107 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 RNU4-32P-201ENST00000363404 141 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 RNU6-455P-201ENST00000384681 107 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 RNA5SP330-201ENST00000517096 96 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.46□□□□□ -2.48
CHMP1AQ9HD42 RNU6-162P-201ENST00000516228 103 ntBASIC-0.46□□□□□ -2.48
CHMP1AQ9HD42 AP000676.1-201ENST00000533307 52 ntBASIC-0.46□□□□□ -2.48
CHMP1AQ9HD42 U7.3-201ENST00000616123 62 ntBASIC-0.46□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.47□□□□□ -2.48
CHMP1AQ9HD42 MIR9-2-201ENST00000384838 87 ntBASIC-0.47□□□□□ -2.48
CHMP1AQ9HD42 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms