Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNU1-119P-201ENST00000391122 165 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-935P-201ENST00000410371 100 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-634P-201ENST00000459134 106 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 MIR4773-1-201ENST00000637203 78 ntBASIC1.27□□□□□ -2.21
SEMA4AQ9H3S1 Y_RNA.30-201ENST00000362572 97 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 RNY4P3-201ENST00000365254 95 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 Y_RNA.340-201ENST00000365330 92 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 SNORA24B-201ENST00000384176 131 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 SNORD45A-201ENST00000384512 84 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-871P-201ENST00000516122 100 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
SEMA4AQ9H3S1 SNORD115-24-201ENST00000363528 82 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-649P-201ENST00000384463 107 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 MIR644A-201ENST00000385262 94 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 U7.7-201ENST00000459276 60 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-539P-201ENST00000516665 103 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 MIR548AG2-201ENST00000581228 64 ntBASIC1.25□□□□□ -2.21
SEMA4AQ9H3S1 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
SEMA4AQ9H3S1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.24□□□□□ -2.21
SEMA4AQ9H3S1 uc_338.16-201ENST00000621804 95 ntBASIC1.24□□□□□ -2.21
SEMA4AQ9H3S1 SNORD45.1-201ENST00000363181 77 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-382P-201ENST00000365181 106 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 MIR942-201ENST00000401111 86 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 RNU7-104P-201ENST00000459398 79 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 RNU7-161P-201ENST00000517289 62 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 MIR3675-201ENST00000583661 73 ntBASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.23□□□□□ -2.21
SEMA4AQ9H3S1 Y_RNA.68-201ENST00000362881 102 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 AC244505.6-201ENST00000452829 130 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 AC097510.1-201ENST00000510945 133 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-1057P-201ENST00000517162 102 ntBASIC1.22□□□□□ -2.21
SEMA4AQ9H3S1 RNU6-590P-201ENST00000365039 107 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 Y_RNA.433-201ENST00000384089 102 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 MIR203A-201ENST00000384836 110 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-663P-201ENST00000391105 106 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 RNU7-13P-201ENST00000516413 62 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 U6.81-201ENST00000612550 106 ntBASIC1.21□□□□□ -2.22
SEMA4AQ9H3S1 MIR193B-201ENST00000384907 83 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 RNA5SP436-201ENST00000516020 115 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 NAMPTP3-201ENST00000569273 224 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
SEMA4AQ9H3S1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-604P-201ENST00000390917 100 ntBASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 MIR1265-201ENST00000408444 86 ntBASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 AC125388.1-201ENST00000459631 156 ntBASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 MIR3920-201ENST00000581751 86 ntBASIC1.19□□□□□ -2.22
SEMA4AQ9H3S1 RNA5SP403-201ENST00000363598 108 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-681P-201ENST00000364012 104 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 SNORD115-22-201ENST00000364456 82 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-800P-201ENST00000384473 103 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 RNU2-59P-201ENST00000410482 191 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 U6.111-201ENST00000636093 83 ntBASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.17□□□□□ -2.22
SEMA4AQ9H3S1 AL590095.2-201ENST00000604136 117 ntBASIC1.17□□□□□ -2.22
SEMA4AQ9H3S1 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
SEMA4AQ9H3S1 AL109933.3-201ENST00000619095 188 ntBASIC1.17□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-54P-201ENST00000365563 107 ntBASIC1.16□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-895P-201ENST00000384125 103 ntBASIC1.16□□□□□ -2.22
SEMA4AQ9H3S1 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
SEMA4AQ9H3S1 RNU6-982P-201ENST00000516216 102 ntBASIC1.16□□□□□ -2.22
SEMA4AQ9H3S1 SNORD105-201ENST00000386910 85 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 AC244098.3-201ENST00000424803 96 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 RNU6-274P-201ENST00000459566 107 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 RNA5SP255-201ENST00000516370 107 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 RNU6-881P-201ENST00000516813 102 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
SEMA4AQ9H3S1 SNORD113.1-201ENST00000363280 73 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 RNA5SP117-201ENST00000365294 118 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 MIR9-2-201ENST00000384838 87 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 MIR519E-201ENST00000385075 84 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 RNU6-630P-201ENST00000391258 106 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 AL691482.2-201ENST00000457453 84 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 AC005520.4-201ENST00000604337 90 ntBASIC1.14□□□□□ -2.23
SEMA4AQ9H3S1 RNU6-716P-201ENST00000365621 103 ntBASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 SNORD116-24-201ENST00000384549 92 ntBASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 AC244669.1-204ENST00000621564 178 ntBASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 AC067863.3-201ENST00000624172 122 ntBASIC1.13□□□□□ -2.23
SEMA4AQ9H3S1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SEMA4AQ9H3S1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms