Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 RNU4-36P-201ENST00000364294 144 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 SNORD113-1-201ENST00000365321 69 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 MIR892B-201ENST00000401279 77 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 RNU6-904P-201ENST00000516206 101 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.01□□□□□ -2.41
ZNF541Q9H0D2 RNU6-664P-201ENST00000362381 107 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 SNORD101-201ENST00000384027 73 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 RNU6-813P-201ENST00000384691 107 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 RNU6-1154P-201ENST00000391001 104 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 RNU7-85P-201ENST00000458851 63 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 RNU6-479P-201ENST00000516348 105 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 SNORA25.13-201ENST00000516395 103 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 AC103810.7-201ENST00000607821 91 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 AC069503.3-201ENST00000618674 145 ntBASIC0□□□□□ -2.41
ZNF541Q9H0D2 MIR409-201ENST00000362237 79 ntBASIC-0.01□□□□□ -2.41
ZNF541Q9H0D2 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.01□□□□□ -2.41
ZNF541Q9H0D2 RNU6-537P-201ENST00000517277 103 ntBASIC-0.01□□□□□ -2.41
ZNF541Q9H0D2 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
ZNF541Q9H0D2 SNORD95.1-201ENST00000364099 68 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-106P-201ENST00000384405 107 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 MT-TY-201ENST00000387409 66 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-313P-201ENST00000516317 112 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-589P-201ENST00000516485 107 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 MIR4460-201ENST00000577862 86 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 YWHAEP2-201ENST00000580066 112 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 MIR4473-201ENST00000583731 91 ntBASIC-0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-834P-201ENST00000362367 110 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 SNORA19-201ENST00000384737 128 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 MIR590-201ENST00000385008 97 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 RNU6-554P-201ENST00000410466 106 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 SCARNA23-201ENST00000516060 130 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
ZNF541Q9H0D2 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 RNU6-756P-201ENST00000383997 107 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 MIR516B1-201ENST00000385211 90 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 RNU6-644P-201ENST00000391155 98 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 MIR548AE1-201ENST00000583292 70 ntBASIC-0.04□□□□□ -2.42
ZNF541Q9H0D2 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 MIR876-201ENST00000401147 81 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 RNA5SP163-201ENST00000410304 99 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 RNU2-51P-201ENST00000410708 197 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 MIR4536-1-201ENST00000583537 88 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 AC084368.1-201ENST00000620935 65 ntBASIC-0.05□□□□□ -2.42
ZNF541Q9H0D2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 MIR1302-5-201ENST00000408164 150 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 RNU6-935P-201ENST00000410371 100 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 AL606753.1-201ENST00000427435 87 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 RNU6-65P-201ENST00000516332 98 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 RNU6-180P-201ENST00000516697 61 ntBASIC-0.06□□□□□ -2.42
ZNF541Q9H0D2 MIR101-1-201ENST00000362265 75 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 RNU6-132P-201ENST00000383863 107 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 SNORA75.1-201ENST00000391130 148 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 RNU7-165P-201ENST00000458864 60 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 SNORD4B-201ENST00000459083 72 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 uc_338.10-201ENST00000621872 182 ntBASIC-0.07□□□□□ -2.42
ZNF541Q9H0D2 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 RNU6-109P-201ENST00000516364 107 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 RNU6-184P-201ENST00000516514 107 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 RN7SL660P-201ENST00000614852 299 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 MIR548O2-201ENST00000616090 70 ntBASIC-0.08□□□□□ -2.42
ZNF541Q9H0D2 SNORD58A-201ENST00000383875 65 ntBASIC-0.09□□□□□ -2.42
ZNF541Q9H0D2 MIR451A-201ENST00000385059 72 ntBASIC-0.09□□□□□ -2.42
ZNF541Q9H0D2 RNU7-159P-201ENST00000459284 62 ntBASIC-0.09□□□□□ -2.42
ZNF541Q9H0D2 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.09□□□□□ -2.42
ZNF541Q9H0D2 RNU7-188P-201ENST00000517063 64 ntBASIC-0.09□□□□□ -2.42
ZNF541Q9H0D2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.1□□□□□ -2.42
ZNF541Q9H0D2 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.1□□□□□ -2.42
ZNF541Q9H0D2 MIR6514-201ENST00000622549 70 ntBASIC-0.1□□□□□ -2.42
ZNF541Q9H0D2 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.11□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.11□□□□□ -2.43
ZNF541Q9H0D2 RNU6-887P-201ENST00000410660 100 ntBASIC-0.11□□□□□ -2.43
ZNF541Q9H0D2 RNU7-61P-201ENST00000515897 61 ntBASIC-0.11□□□□□ -2.43
ZNF541Q9H0D2 RNU6-406P-201ENST00000516470 107 ntBASIC-0.11□□□□□ -2.43
ZNF541Q9H0D2 RNU6-154P-201ENST00000384306 106 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 MIR106A-201ENST00000384870 81 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 MIR216B-201ENST00000390186 82 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 RNU6-972P-201ENST00000391208 107 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 RNU6-719P-201ENST00000516671 104 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 CR383656.4-201ENST00000546909 122 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 MIR3064-201ENST00000581130 66 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.12□□□□□ -2.43
ZNF541Q9H0D2 RNY4P18-201ENST00000391107 89 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms