Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MIR6828-201ENST00000636181 60 ntBASIC0.99□□□□□ -2.25
KRTAP3-1Q9BYR8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP3-1Q9BYR8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP3-1Q9BYR8 SNORD48-201ENST00000364953 64 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 SNORA64-201ENST00000384674 134 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 MIR517C-201ENST00000385103 95 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 RPL23AP94-201ENST00000512518 302 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 U2.7-201ENST00000619197 100 ntBASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP3-1Q9BYR8 SNORA33.1-201ENST00000364957 130 ntBASIC0.97□□□□□ -2.25
KRTAP3-1Q9BYR8 RNU4-53P-201ENST00000410828 140 ntBASIC0.97□□□□□ -2.25
KRTAP3-1Q9BYR8 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
KRTAP3-1Q9BYR8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.97□□□□□ -2.25
KRTAP3-1Q9BYR8 MIR3162-201ENST00000581818 82 ntBASIC0.97□□□□□ -2.25
KRTAP3-1Q9BYR8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 Y_RNA.125-201ENST00000363371 111 ntBASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 RNU6-520P-201ENST00000384717 104 ntBASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 Y_RNA.633-201ENST00000459107 95 ntBASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR4473-201ENST00000583731 91 ntBASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.96□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 RNU6-1184P-201ENST00000384588 108 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR652-201ENST00000385278 98 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORD110-201ENST00000408189 75 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 RNA5SP268-201ENST00000516828 124 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 AC012493.3-201ENST00000604494 112 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 U4.4-201ENST00000620626 117 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR219B-201ENST00000637023 88 ntBASIC0.95□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR18A-201ENST00000362310 71 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORA16.1-201ENST00000364597 132 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORD113-4-201ENST00000364802 75 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORA26.9-201ENST00000391322 122 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORA11-201ENST00000408789 128 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR4419B-201ENST00000577260 68 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR6873-201ENST00000622788 63 ntBASIC0.94□□□□□ -2.26
KRTAP3-1Q9BYR8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR548E-201ENST00000408287 88 ntBASIC0.93□□□□□ -2.26
KRTAP3-1Q9BYR8 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
KRTAP3-1Q9BYR8 AC011195.1-201ENST00000578177 177 ntBASIC0.93□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR548AE1-201ENST00000583292 70 ntBASIC0.93□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR618-201ENST00000385287 98 ntBASIC0.92□□□□□ -2.26
KRTAP3-1Q9BYR8 RNU7-119P-201ENST00000459279 63 ntBASIC0.92□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR6798-201ENST00000612887 67 ntBASIC0.92□□□□□ -2.26
KRTAP3-1Q9BYR8 RNU6-1312P-201ENST00000362425 108 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 Y_RNA.246-201ENST00000364495 108 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORA25.8-201ENST00000364831 128 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR582-201ENST00000365731 98 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORD26-201ENST00000384147 75 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 AL356320.1-201ENST00000429616 163 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 AC003989.2-201ENST00000440224 169 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 RNA5SP94-201ENST00000516917 108 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR1273D-201ENST00000577266 86 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 MIR7107-201ENST00000611489 80 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 U6.96-201ENST00000636425 70 ntBASIC0.91□□□□□ -2.26
KRTAP3-1Q9BYR8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.9□□□□□ -2.26
KRTAP3-1Q9BYR8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORA36.1-201ENST00000363424 132 ntBASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 AL021921.1-201ENST00000442774 93 ntBASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU1-124P-201ENST00000363861 145 ntBASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 RNA5SP363-201ENST00000365072 115 ntBASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR9-3-201ENST00000385084 90 ntBASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 RN7SKP223-201ENST00000410582 62 ntBASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR4672-201ENST00000583126 81 ntBASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP3-1Q9BYR8 Y_RNA.379-201ENST00000365653 102 ntBASIC0.88□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.88□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORA3.2-201ENST00000408221 125 ntBASIC0.88□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR3122-201ENST00000577243 73 ntBASIC0.88□□□□□ -2.27
KRTAP3-1Q9BYR8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORA11.1-201ENST00000408133 129 ntBASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 RPS29P23-201ENST00000458635 123 ntBASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORD2-201ENST00000459163 69 ntBASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6-518P-201ENST00000516056 96 ntBASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 RNA5SP404-201ENST00000517118 132 ntBASIC0.87□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR20A-201ENST00000362279 71 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORA9.1-201ENST00000362412 131 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 Y_RNA.325-201ENST00000365171 122 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR483-201ENST00000385070 76 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR516B1-201ENST00000385211 90 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6-482P-201ENST00000391068 107 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 RNA5SP222-201ENST00000411039 105 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 AC244090.1-201ENST00000441884 93 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 CYP3A54P-201ENST00000566950 75 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR5706-201ENST00000579841 80 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms