Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.85□□□□□ -2.11
HPS1Q92902 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HPS1Q92902 MIR644A-201ENST00000385262 94 ntBASIC1.84□□□□□ -2.11
HPS1Q92902 MIR4769-201ENST00000584126 77 ntBASIC1.84□□□□□ -2.11
HPS1Q92902 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.84□□□□□ -2.11
HPS1Q92902 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.84□□□□□ -2.11
HPS1Q92902 RNU6-726P-201ENST00000364680 107 ntBASIC1.83□□□□□ -2.12
HPS1Q92902 RNU6-910P-201ENST00000390844 107 ntBASIC1.83□□□□□ -2.12
HPS1Q92902 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
HPS1Q92902 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
HPS1Q92902 Y_RNA.125-201ENST00000363371 111 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 RNU6-35P-201ENST00000384530 107 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 MIR548L-201ENST00000408303 86 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HPS1Q92902 AC015712.3-201ENST00000559380 164 ntBASIC1.82□□□□□ -2.12
HPS1Q92902 SNORA41B-201ENST00000384785 128 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 RNU5B-6P-201ENST00000516765 68 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 RNU6-231P-201ENST00000517122 103 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
HPS1Q92902 SNORA33.1-201ENST00000364957 130 ntBASIC1.8□□□□□ -2.12
HPS1Q92902 SNORA8.2-201ENST00000384372 139 ntBASIC1.8□□□□□ -2.12
HPS1Q92902 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
HPS1Q92902 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
HPS1Q92902 RNU4-33P-201ENST00000364316 85 ntBASIC1.79□□□□□ -2.12
HPS1Q92902 Y_RNA.246-201ENST00000364495 108 ntBASIC1.79□□□□□ -2.12
HPS1Q92902 MIR758-201ENST00000390227 88 ntBASIC1.79□□□□□ -2.12
HPS1Q92902 RNU6-469P-201ENST00000516253 101 ntBASIC1.79□□□□□ -2.12
HPS1Q92902 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.79□□□□□ -2.12
HPS1Q92902 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HPS1Q92902 RNU6-930P-201ENST00000390938 100 ntBASIC1.78□□□□□ -2.12
HPS1Q92902 Y_RNA.325-201ENST00000365171 122 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 RNU6-269P-201ENST00000391077 97 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 RNA5SP47-201ENST00000517230 109 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 MIR4781-201ENST00000585250 76 ntBASIC1.77□□□□□ -2.13
HPS1Q92902 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HPS1Q92902 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HPS1Q92902 SNORA63.6-201ENST00000364921 119 ntBASIC1.76□□□□□ -2.13
HPS1Q92902 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
HPS1Q92902 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.76□□□□□ -2.13
HPS1Q92902 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.76□□□□□ -2.13
HPS1Q92902 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HPS1Q92902 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HPS1Q92902 SNORD18A-201ENST00000363753 72 ntBASIC1.75□□□□□ -2.13
HPS1Q92902 SNORD12-201ENST00000391002 90 ntBASIC1.75□□□□□ -2.13
HPS1Q92902 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
HPS1Q92902 SCARNA17.3-201ENST00000516381 125 ntBASIC1.75□□□□□ -2.13
HPS1Q92902 RNU6-548P-201ENST00000517083 115 ntBASIC1.75□□□□□ -2.13
HPS1Q92902 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.75□□□□□ -2.13
HPS1Q92902 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HPS1Q92902 MIR764-201ENST00000390811 85 ntBASIC1.74□□□□□ -2.13
HPS1Q92902 MIR548F3-201ENST00000408509 87 ntBASIC1.74□□□□□ -2.13
HPS1Q92902 RNA5SP484-201ENST00000458857 111 ntBASIC1.74□□□□□ -2.13
HPS1Q92902 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
HPS1Q92902 RNU6-716P-201ENST00000365621 103 ntBASIC1.73□□□□□ -2.13
HPS1Q92902 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
HPS1Q92902 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
HPS1Q92902 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HPS1Q92902 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
HPS1Q92902 SNORA70.22-201ENST00000517160 124 ntBASIC1.72□□□□□ -2.13
HPS1Q92902 SNORA40.16-201ENST00000517238 121 ntBASIC1.72□□□□□ -2.13
HPS1Q92902 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
HPS1Q92902 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HPS1Q92902 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HPS1Q92902 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
HPS1Q92902 SNORA25.8-201ENST00000364831 128 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 Y_RNA.407-201ENST00000383986 113 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 SNORD116-16-201ENST00000384533 92 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 MIR548X-201ENST00000580069 75 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 AL162376.1-201ENST00000624117 175 ntBASIC1.71□□□□□ -2.14
HPS1Q92902 Y_RNA.74-201ENST00000362911 99 ntBASIC1.7□□□□□ -2.14
HPS1Q92902 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
HPS1Q92902 MIR652-201ENST00000385278 98 ntBASIC1.7□□□□□ -2.14
HPS1Q92902 SNORD116.2-201ENST00000391251 93 ntBASIC1.7□□□□□ -2.14
HPS1Q92902 SCARNA16.5-201ENST00000517114 183 ntBASIC1.7□□□□□ -2.14
HPS1Q92902 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HPS1Q92902 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
HPS1Q92902 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HPS1Q92902 SNORA9.1-201ENST00000362412 131 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 RNU6-1246P-201ENST00000391064 107 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.69□□□□□ -2.14
HPS1Q92902 AL021921.1-201ENST00000442774 93 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 RNU6-1110P-201ENST00000516462 101 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 CYP3A54P-201ENST00000566950 75 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 MIR7110-201ENST00000612638 86 ntBASIC1.69□□□□□ -2.14
HPS1Q92902 MIR582-201ENST00000365731 98 ntBASIC1.68□□□□□ -2.14
HPS1Q92902 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
HPS1Q92902 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
HPS1Q92902 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
HPS1Q92902 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
HPS1Q92902 SNORD105-201ENST00000386910 85 ntBASIC1.67□□□□□ -2.14
HPS1Q92902 MIR548E-201ENST00000408287 88 ntBASIC1.67□□□□□ -2.14
HPS1Q92902 AC002429.1-201ENST00000437672 148 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 263.7 ms