Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.9□□□□□ -2.55
UFD1Q92890 RNU6-75P-201ENST00000515944 104 ntBASIC-0.9□□□□□ -2.55
UFD1Q92890 RNU6-388P-201ENST00000517012 105 ntBASIC-0.9□□□□□ -2.55
UFD1Q92890 RNU6-389P-201ENST00000517048 105 ntBASIC-0.9□□□□□ -2.55
UFD1Q92890 MIR6851-201ENST00000617060 67 ntBASIC-0.9□□□□□ -2.55
UFD1Q92890 SNORD114-4-201ENST00000363962 75 ntBASIC-0.91□□□□□ -2.56
UFD1Q92890 SNORD58C-201ENST00000365223 64 ntBASIC-0.91□□□□□ -2.56
UFD1Q92890 MIR582-201ENST00000365731 98 ntBASIC-0.91□□□□□ -2.56
UFD1Q92890 MIR548E-201ENST00000408287 88 ntBASIC-0.91□□□□□ -2.56
UFD1Q92890 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 MIR569-201ENST00000385228 96 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 MIR196A1-201ENST00000388006 70 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 AC021146.6-201ENST00000514659 117 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 RNA5SP67-201ENST00000516422 131 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 MTND5P18-201ENST00000445624 1801 ntBASIC-0.92□□□□□ -2.56
UFD1Q92890 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 RNU6-804P-201ENST00000384286 107 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 SNORD38.3-201ENST00000516599 73 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 MIR3144-201ENST00000579460 79 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 AC025521.1-201ENST00000621624 286 ntBASIC-0.93□□□□□ -2.56
UFD1Q92890 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.94□□□□□ -2.56
UFD1Q92890 MIR577-201ENST00000385196 96 ntBASIC-0.94□□□□□ -2.56
UFD1Q92890 RNU6-65P-201ENST00000516332 98 ntBASIC-0.94□□□□□ -2.56
UFD1Q92890 RNU6-973P-201ENST00000364690 107 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 SNORA13-201ENST00000458790 133 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 MIR4694-201ENST00000578534 80 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 MIR4536-1-201ENST00000583537 88 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 RNU6-86P-201ENST00000606534 107 ntBASIC-0.95□□□□□ -2.56
UFD1Q92890 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.96□□□□□ -2.56
UFD1Q92890 MT-TG-201ENST00000387429 68 ntBASIC-0.96□□□□□ -2.56
UFD1Q92890 SNORD42B-201ENST00000458893 67 ntBASIC-0.96□□□□□ -2.56
UFD1Q92890 AC097510.1-201ENST00000510945 133 ntBASIC-0.96□□□□□ -2.56
UFD1Q92890 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.96□□□□□ -2.56
UFD1Q92890 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 SNORD50.2-201ENST00000365465 70 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 MIR4324-201ENST00000584846 72 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 MIR6738-201ENST00000619620 64 ntBASIC-0.97□□□□□ -2.56
UFD1Q92890 RNU6-502P-201ENST00000362419 108 ntBASIC-0.98□□□□□ -2.57
UFD1Q92890 RNU6-476P-201ENST00000384726 107 ntBASIC-0.98□□□□□ -2.57
UFD1Q92890 FGF7P7-201ENST00000514120 227 ntBASIC-0.98□□□□□ -2.57
UFD1Q92890 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.98□□□□□ -2.57
UFD1Q92890 RNU6-832P-201ENST00000363319 107 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 MIR587-201ENST00000384845 96 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 RNA5SP272-201ENST00000516095 111 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 RNU6-719P-201ENST00000516671 104 ntBASIC-0.99□□□□□ -2.57
UFD1Q92890 SNORD83B-201ENST00000386745 93 ntBASIC-1□□□□□ -2.57
UFD1Q92890 RNU7-85P-201ENST00000458851 63 ntBASIC-1□□□□□ -2.57
UFD1Q92890 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1□□□□□ -2.57
UFD1Q92890 RNU6-881P-201ENST00000516813 102 ntBASIC-1□□□□□ -2.57
UFD1Q92890 AL513043.2-201ENST00000573941 143 ntBASIC-1□□□□□ -2.57
UFD1Q92890 AL035470.1-201ENST00000622571 220 ntBASIC-1□□□□□ -2.57
UFD1Q92890 RNY3P2-201ENST00000362918 102 ntBASIC-1.01□□□□□ -2.57
UFD1Q92890 RNU6-10P-201ENST00000384036 107 ntBASIC-1.01□□□□□ -2.57
UFD1Q92890 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.01□□□□□ -2.57
UFD1Q92890 RNU6-426P-201ENST00000516464 97 ntBASIC-1.01□□□□□ -2.57
UFD1Q92890 MIR4679-2-201ENST00000578358 77 ntBASIC-1.01□□□□□ -2.57
UFD1Q92890 RNU4-36P-201ENST00000364294 144 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 MIR518B-201ENST00000385127 83 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 RNU6-772P-201ENST00000516042 105 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 MTND5P41-201ENST00000517498 206 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 MIR5704-201ENST00000584029 77 ntBASIC-1.02□□□□□ -2.57
UFD1Q92890 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 RNU6-182P-201ENST00000516970 105 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 MIR3179-1-201ENST00000578940 84 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 MIR3179-2-201ENST00000579107 84 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 MIR3179-3-201ENST00000579566 84 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 MIR4439-201ENST00000583746 80 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 AL353621.2-201ENST00000605340 133 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 MIR3179-4-201ENST00000617599 84 ntBASIC-1.03□□□□□ -2.57
UFD1Q92890 RNU6-132P-201ENST00000383863 107 ntBASIC-1.04□□□□□ -2.58
UFD1Q92890 MTND4LP9-201ENST00000427694 174 ntBASIC-1.04□□□□□ -2.58
UFD1Q92890 SNORD57-201ENST00000448188 72 ntBASIC-1.04□□□□□ -2.58
UFD1Q92890 RNY1P9-201ENST00000532431 109 ntBASIC-1.04□□□□□ -2.58
UFD1Q92890 MIR6854-201ENST00000614935 69 ntBASIC-1.04□□□□□ -2.58
UFD1Q92890 SNORA63.2-201ENST00000362603 126 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 SNORA63.6-201ENST00000364921 119 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 MIR548U-201ENST00000390728 81 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
UFD1Q92890 AC068339.1-201ENST00000526965 141 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 MIR3613-201ENST00000579844 87 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 MIR6773-201ENST00000612812 74 ntBASIC-1.05□□□□□ -2.58
UFD1Q92890 AL157777.2-201ENST00000258070 137 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 SNORD45B-201ENST00000364617 72 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 RNU6-24P-201ENST00000384440 107 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms