Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 MIR548AG2-201ENST00000581228 64 ntBASIC0.92□□□□□ -2.26
RUFY4Q6ZNE9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 MIR451A-201ENST00000385059 72 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 MIR4714-201ENST00000580728 77 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
RUFY4Q6ZNE9 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
RUFY4Q6ZNE9 SNORA8.2-201ENST00000384372 139 ntBASIC0.9□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-592P-201ENST00000411333 103 ntBASIC0.9□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-557P-201ENST00000516842 110 ntBASIC0.9□□□□□ -2.27
RUFY4Q6ZNE9 AL162376.1-201ENST00000624117 175 ntBASIC0.9□□□□□ -2.27
RUFY4Q6ZNE9 RNU5F-1-201ENST00000362507 117 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 Y_RNA.264-201ENST00000364665 102 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-716P-201ENST00000365621 103 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 MIR519E-201ENST00000385075 84 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 AC092634.7-201ENST00000621022 103 ntBASIC0.89□□□□□ -2.27
RUFY4Q6ZNE9 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
RUFY4Q6ZNE9 MIR1273G-201ENST00000577677 100 ntBASIC0.88□□□□□ -2.27
RUFY4Q6ZNE9 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-573P-201ENST00000383938 106 ntBASIC0.87□□□□□ -2.27
RUFY4Q6ZNE9 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
RUFY4Q6ZNE9 AC073869.9-201ENST00000641610 120 ntBASIC0.87□□□□□ -2.27
RUFY4Q6ZNE9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-129P-201ENST00000391022 107 ntBASIC0.86□□□□□ -2.27
RUFY4Q6ZNE9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.86□□□□□ -2.27
RUFY4Q6ZNE9 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
RUFY4Q6ZNE9 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
RUFY4Q6ZNE9 Y_RNA.316-201ENST00000365118 111 ntBASIC0.85□□□□□ -2.27
RUFY4Q6ZNE9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.85□□□□□ -2.27
RUFY4Q6ZNE9 AC093423.1-201ENST00000440817 142 ntBASIC0.85□□□□□ -2.27
RUFY4Q6ZNE9 MIR7107-201ENST00000611489 80 ntBASIC0.85□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-315P-201ENST00000362666 107 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 SNORD114-23-201ENST00000363536 72 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 SNORD77.2-201ENST00000391045 68 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 RNU6-269P-201ENST00000391077 97 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
RUFY4Q6ZNE9 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 SNORD78.1-201ENST00000390866 65 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 SNORD71-201ENST00000411292 86 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 MIR1245B-201ENST00000636115 69 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 AC010487.4-201ENST00000637027 61 ntBASIC0.83□□□□□ -2.28
RUFY4Q6ZNE9 RNU1-141P-201ENST00000364623 158 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-787P-201ENST00000384032 107 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 SNORA24B-201ENST00000384176 131 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-380P-201ENST00000410207 107 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 RNU2-59P-201ENST00000410482 191 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 Y_RNA.685-201ENST00000516532 108 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 MIR548O2-201ENST00000616090 70 ntBASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-208P-201ENST00000362431 107 ntBASIC0.81□□□□□ -2.28
RUFY4Q6ZNE9 AL450471.1-201ENST00000447509 127 ntBASIC0.81□□□□□ -2.28
RUFY4Q6ZNE9 MIR3140-201ENST00000583685 90 ntBASIC0.81□□□□□ -2.28
RUFY4Q6ZNE9 MIR924-201ENST00000638017 53 ntBASIC0.81□□□□□ -2.28
RUFY4Q6ZNE9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNA5SP457-201ENST00000363657 124 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-686P-201ENST00000364839 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-652P-201ENST00000365488 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 SNORD90-201ENST00000391145 111 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 AC097510.1-201ENST00000510945 133 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-848P-201ENST00000515948 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-617P-201ENST00000516147 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-473P-201ENST00000516164 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-1124P-201ENST00000384169 107 ntBASIC0.79□□□□□ -2.28
RUFY4Q6ZNE9 MIR518A1-201ENST00000385068 85 ntBASIC0.79□□□□□ -2.28
RUFY4Q6ZNE9 MT-TY-201ENST00000387409 66 ntBASIC0.79□□□□□ -2.28
RUFY4Q6ZNE9 MIR5706-201ENST00000579841 80 ntBASIC0.79□□□□□ -2.28
RUFY4Q6ZNE9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.79□□□□□ -2.28
RUFY4Q6ZNE9 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
RUFY4Q6ZNE9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-863P-201ENST00000515989 104 ntBASIC0.78□□□□□ -2.28
RUFY4Q6ZNE9 MIR4460-201ENST00000577862 86 ntBASIC0.78□□□□□ -2.28
RUFY4Q6ZNE9 AC069503.3-201ENST00000618674 145 ntBASIC0.78□□□□□ -2.28
RUFY4Q6ZNE9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.77□□□□□ -2.29
RUFY4Q6ZNE9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.77□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-719P-201ENST00000516671 104 ntBASIC0.77□□□□□ -2.29
RUFY4Q6ZNE9 MIRLET7A1-201ENST00000362295 80 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-228P-201ENST00000362700 106 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-161P-201ENST00000363051 106 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 Y_RNA.313-201ENST00000365095 103 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 snoU13.17-201ENST00000458802 104 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 YWHAEP2-201ENST00000580066 112 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 YWHAEP3-201ENST00000582767 121 ntBASIC0.76□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-478P-201ENST00000363904 110 ntBASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 Y_RNA.606-201ENST00000410579 103 ntBASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 RNA5SP484-201ENST00000458857 111 ntBASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.75□□□□□ -2.29
RUFY4Q6ZNE9 RNU6-681P-201ENST00000364012 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms