Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 MIR517B-201ENST00000385102 67 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 MIR378F-201ENST00000578143 78 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 U6.100-201ENST00000636230 99 ntBASIC-0.59□□□□□ -2.5
RPUSD3Q6P087 SNORD115-25-201ENST00000362619 82 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 RNU6-337P-201ENST00000391243 106 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 AL161932.1-201ENST00000437408 146 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 AC074198.2-201ENST00000508153 258 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 MIR4464-201ENST00000580818 92 ntBASIC-0.6□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.61□□□□□ -2.51
RPUSD3Q6P087 AL353813.1-201ENST00000440700 253 ntBASIC-0.61□□□□□ -2.51
RPUSD3Q6P087 AP000533.3-201ENST00000447704 118 ntBASIC-0.61□□□□□ -2.51
RPUSD3Q6P087 AC099654.10-201ENST00000640395 161 ntBASIC-0.61□□□□□ -2.51
RPUSD3Q6P087 SNORD83B-201ENST00000386745 93 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 RNU6-466P-201ENST00000391224 103 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 AC244090.1-201ENST00000441884 93 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 AC021146.6-201ENST00000514659 117 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 SNORA40.17-201ENST00000517256 115 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 MIR4324-201ENST00000584846 72 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 uc_338.19-201ENST00000616808 99 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.62□□□□□ -2.51
RPUSD3Q6P087 MIR20A-201ENST00000362279 71 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 MIR518B-201ENST00000385127 83 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 SNORD42B-201ENST00000458893 67 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 AC022137.1-201ENST00000483735 151 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 AL353621.2-201ENST00000605340 133 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 AL627230.5-201ENST00000619807 58 ntBASIC-0.63□□□□□ -2.51
RPUSD3Q6P087 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 AC026421.1-201ENST00000519101 163 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 MIR3144-201ENST00000579460 79 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 MIR6854-201ENST00000614935 69 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 MIR548O2-201ENST00000616090 70 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 AC090617.8-201ENST00000623339 167 ntBASIC-0.64□□□□□ -2.51
RPUSD3Q6P087 RNU6-235P-201ENST00000362644 107 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 RNU6-54P-201ENST00000365563 107 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 AC068339.1-201ENST00000526965 141 ntBASIC-0.65□□□□□ -2.51
RPUSD3Q6P087 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 RNU6-30P-201ENST00000384561 107 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 MIRLET7B-201ENST00000385140 83 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 MT-TQ-201ENST00000387372 72 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 MIR3115-201ENST00000577915 68 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 AC025166.1-201ENST00000612411 163 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 MIR6773-201ENST00000612812 74 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 AL442128.1-201ENST00000615151 90 ntBASIC-0.66□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.67□□□□□ -2.52
RPUSD3Q6P087 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.67□□□□□ -2.52
RPUSD3Q6P087 AC140658.3-201ENST00000567603 271 ntBASIC-0.67□□□□□ -2.52
RPUSD3Q6P087 MIR4306-201ENST00000583390 91 ntBASIC-0.67□□□□□ -2.52
RPUSD3Q6P087 MIR6738-201ENST00000619620 64 ntBASIC-0.67□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.68□□□□□ -2.52
RPUSD3Q6P087 RNU6-24P-201ENST00000384440 107 ntBASIC-0.68□□□□□ -2.52
RPUSD3Q6P087 MIR8485-201ENST00000401372 91 ntBASIC-0.68□□□□□ -2.52
RPUSD3Q6P087 RNU2-51P-201ENST00000410708 197 ntBASIC-0.68□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.68□□□□□ -2.52
RPUSD3Q6P087 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-957P-201ENST00000363652 99 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 SNORD101-201ENST00000384027 73 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-804P-201ENST00000384286 107 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-816P-201ENST00000390914 107 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 RNU6-762P-201ENST00000517107 102 ntBASIC-0.69□□□□□ -2.52
RPUSD3Q6P087 SNORD74.6-201ENST00000364796 70 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 MIR569-201ENST00000385228 96 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 snoU13.11-201ENST00000459219 104 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 RNU6-274P-201ENST00000459566 107 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 RNU6-479P-201ENST00000516348 105 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 RNU6-781P-201ENST00000516377 101 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 MIR4696-201ENST00000581431 70 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 MIR6888-201ENST00000621977 67 ntBASIC-0.7□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.71□□□□□ -2.52
RPUSD3Q6P087 SNORD114-17-201ENST00000364699 75 ntBASIC-0.71□□□□□ -2.52
RPUSD3Q6P087 RNU6-746P-201ENST00000384112 109 ntBASIC-0.71□□□□□ -2.52
RPUSD3Q6P087 RNU6-75P-201ENST00000515944 104 ntBASIC-0.71□□□□□ -2.52
RPUSD3Q6P087 SNORD58C-201ENST00000365223 64 ntBASIC-0.72□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
RPUSD3Q6P087 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.72□□□□□ -2.52
RPUSD3Q6P087 RNU6-664P-201ENST00000362381 107 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 333.4 ms