Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC067863.3-201ENST00000624172 122 ntBASIC2.06□□□□□ -2.08
CTC1Q2NKJ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 MIR302D-201ENST00000362275 68 ntBASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 RNU1-119P-201ENST00000391122 165 ntBASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 SNORD116.2-201ENST00000391251 93 ntBASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 MIR548F3-201ENST00000408509 87 ntBASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 TRMT112P2-201ENST00000512910 132 ntBASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CTC1Q2NKJ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
CTC1Q2NKJ3 SNORD111-201ENST00000408139 94 ntBASIC2.04□□□□□ -2.08
CTC1Q2NKJ3 RNU4-62P-201ENST00000410125 130 ntBASIC2.04□□□□□ -2.08
CTC1Q2NKJ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CTC1Q2NKJ3 Y_RNA.250-201ENST00000364542 110 ntBASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 RNU7-56P-201ENST00000458744 62 ntBASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 AC048334.1-201ENST00000477975 159 ntBASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 MIR4460-201ENST00000577862 86 ntBASIC2.03□□□□□ -2.08
CTC1Q2NKJ3 Y_RNA.174-201ENST00000363781 105 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 Y_RNA.325-201ENST00000365171 122 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 MIR545-201ENST00000385085 106 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 MT-TY-201ENST00000387409 66 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 AL136317.1-201ENST00000612653 226 ntBASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CTC1Q2NKJ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 SNORA33.1-201ENST00000364957 130 ntBASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 MIR489-201ENST00000384923 84 ntBASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 RNU6-994P-201ENST00000410507 111 ntBASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 MIR4422-201ENST00000581938 83 ntBASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
CTC1Q2NKJ3 SNORA9.1-201ENST00000362412 131 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 Y_RNA.125-201ENST00000363371 111 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 RNU6-1246P-201ENST00000391064 107 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 RNU5B-6P-201ENST00000516765 68 ntBASIC2□□□□□ -2.09
CTC1Q2NKJ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
CTC1Q2NKJ3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 MIR520F-201ENST00000384824 87 ntBASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 MIR100-201ENST00000385259 80 ntBASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 SNORA40.16-201ENST00000517238 121 ntBASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 AC084768.2-201ENST00000622736 221 ntBASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CTC1Q2NKJ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.98□□□□□ -2.09
CTC1Q2NKJ3 RNU7-74P-201ENST00000459104 62 ntBASIC1.98□□□□□ -2.09
CTC1Q2NKJ3 SNORA31.2-201ENST00000516019 134 ntBASIC1.98□□□□□ -2.09
CTC1Q2NKJ3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 MIR644A-201ENST00000385262 94 ntBASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 MIR4303-201ENST00000581299 66 ntBASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.97□□□□□ -2.09
CTC1Q2NKJ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CTC1Q2NKJ3 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
CTC1Q2NKJ3 MIR548L-201ENST00000408303 86 ntBASIC1.96□□□□□ -2.1
CTC1Q2NKJ3 AL512310.8-201ENST00000550183 120 ntBASIC1.96□□□□□ -2.1
CTC1Q2NKJ3 SNORD114-4-201ENST00000363962 75 ntBASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 MIR548X-201ENST00000580069 75 ntBASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.95□□□□□ -2.1
CTC1Q2NKJ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
CTC1Q2NKJ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
CTC1Q2NKJ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 7SK.8-201ENST00000612110 250 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 MIR7110-201ENST00000612638 86 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 7SK.11-201ENST00000615477 250 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 AC244669.1-204ENST00000621564 178 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 7SK.13-201ENST00000622040 250 ntBASIC1.93□□□□□ -2.1
CTC1Q2NKJ3 MIR1-1-201ENST00000362147 71 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 RNU1-141P-201ENST00000364623 158 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 SNORA15B-1-201ENST00000384334 135 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 SNORD41.1-201ENST00000391000 69 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 RNU7-95P-201ENST00000459222 64 ntBASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CTC1Q2NKJ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 AL591704.2-201ENST00000421658 181 ntBASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 snoU13.18-201ENST00000459483 104 ntBASIC1.91□□□□□ -2.1
CTC1Q2NKJ3 RNU6-810P-201ENST00000364001 107 ntBASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 RNU6-716P-201ENST00000365621 103 ntBASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 MIR1276-201ENST00000408707 83 ntBASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.9□□□□□ -2.11
CTC1Q2NKJ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms