Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
SF3B3Q15393 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.78□□□□□ -2.28
SF3B3Q15393 MIR3202-2-201ENST00000635980 79 ntBASIC0.78□□□□□ -2.28
SF3B3Q15393 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SF3B3Q15393 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
SF3B3Q15393 RNY1P8-201ENST00000383970 114 ntBASIC0.77□□□□□ -2.29
SF3B3Q15393 MIR617-201ENST00000385030 97 ntBASIC0.77□□□□□ -2.29
SF3B3Q15393 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
SF3B3Q15393 Y_RNA.316-201ENST00000365118 111 ntBASIC0.76□□□□□ -2.29
SF3B3Q15393 RNU6-1051P-201ENST00000365471 102 ntBASIC0.76□□□□□ -2.29
SF3B3Q15393 Y_RNA.437-201ENST00000384113 113 ntBASIC0.76□□□□□ -2.29
SF3B3Q15393 MIR451A-201ENST00000385059 72 ntBASIC0.76□□□□□ -2.29
SF3B3Q15393 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
SF3B3Q15393 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.76□□□□□ -2.29
SF3B3Q15393 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
SF3B3Q15393 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
SF3B3Q15393 MIR519E-201ENST00000385075 84 ntBASIC0.75□□□□□ -2.29
SF3B3Q15393 SNORD78.1-201ENST00000390866 65 ntBASIC0.75□□□□□ -2.29
SF3B3Q15393 SNORA63.2-201ENST00000362603 126 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNU6-228P-201ENST00000362700 106 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNA5SP325-201ENST00000363756 130 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 Y_RNA.313-201ENST00000365095 103 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNU6-716P-201ENST00000365621 103 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNU6-1124P-201ENST00000384169 107 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 MIR548L-201ENST00000408303 86 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.74□□□□□ -2.29
SF3B3Q15393 MIR3140-201ENST00000583685 90 ntBASIC0.74□□□□□ -2.29
SF3B3Q15393 RNU6-652P-201ENST00000365488 107 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 U3.27-201ENST00000391237 200 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 RNU7-74P-201ENST00000459104 62 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 FGF7P7-201ENST00000514120 227 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 RNA5SP268-201ENST00000516828 124 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 RNU6-557P-201ENST00000516842 110 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 RNU6-1057P-201ENST00000517162 102 ntBASIC0.73□□□□□ -2.29
SF3B3Q15393 RNY4P3-201ENST00000365254 95 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 SNORA24B-201ENST00000384176 131 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 AL450471.1-201ENST00000447509 127 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 RNA5SP227-201ENST00000516184 113 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 AL162376.1-201ENST00000624117 175 ntBASIC0.72□□□□□ -2.29
SF3B3Q15393 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
SF3B3Q15393 RNU6-478P-201ENST00000363904 110 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 RNU6-129P-201ENST00000391022 107 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 RNU6-269P-201ENST00000391077 97 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 RNU6-1275P-201ENST00000391087 107 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 AC093423.1-201ENST00000440817 142 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 snoU13.17-201ENST00000458802 104 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
SF3B3Q15393 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 MIR1255A-201ENST00000408338 113 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 RNU6-1052P-201ENST00000411398 104 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 Y_RNA.660-201ENST00000516002 120 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 Y_RNA.685-201ENST00000516532 108 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 RNA5SP395-201ENST00000516567 118 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 RNU6-719P-201ENST00000516671 104 ntBASIC0.7□□□□□ -2.3
SF3B3Q15393 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SF3B3Q15393 RNU5F-1-201ENST00000362507 117 ntBASIC0.69□□□□□ -2.3
SF3B3Q15393 RNU6-315P-201ENST00000362666 107 ntBASIC0.69□□□□□ -2.3
SF3B3Q15393 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
SF3B3Q15393 MIR216B-201ENST00000390186 82 ntBASIC0.69□□□□□ -2.3
SF3B3Q15393 SNORD77.2-201ENST00000391045 68 ntBASIC0.69□□□□□ -2.3
SF3B3Q15393 RNU6-161P-201ENST00000363051 106 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 Y_RNA.94-201ENST00000363068 106 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 RNU6-1108P-201ENST00000516308 104 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.68□□□□□ -2.3
SF3B3Q15393 MIR4712-201ENST00000583750 82 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 AC092634.7-201ENST00000621022 103 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 AC010487.4-201ENST00000637027 61 ntBASIC0.68□□□□□ -2.3
SF3B3Q15393 RNU6-208P-201ENST00000362431 107 ntBASIC0.67□□□□□ -2.3
SF3B3Q15393 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
SF3B3Q15393 MIR548O2-201ENST00000616090 70 ntBASIC0.67□□□□□ -2.3
SF3B3Q15393 MIRLET7A1-201ENST00000362295 80 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 RNU1-141P-201ENST00000364623 158 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 Y_RNA.264-201ENST00000364665 102 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 RNU6-686P-201ENST00000364839 107 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SF3B3Q15393 RNU6-279P-201ENST00000391297 101 ntBASIC0.66□□□□□ -2.3
SF3B3Q15393 RNA5SP225-201ENST00000410874 135 ntBASIC0.65□□□□□ -2.31
SF3B3Q15393 SNORA25.18-201ENST00000607153 114 ntBASIC0.65□□□□□ -2.31
SF3B3Q15393 MT-TY-201ENST00000387409 66 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 RNU2-59P-201ENST00000410482 191 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 RNA5SP484-201ENST00000458857 111 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 AC097510.1-201ENST00000510945 133 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 MIR1273G-201ENST00000577677 100 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 AC073869.9-201ENST00000641610 120 ntBASIC0.64□□□□□ -2.31
SF3B3Q15393 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SF3B3Q15393 RNU6-1177P-201ENST00000391058 104 ntBASIC0.63□□□□□ -2.31
SF3B3Q15393 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
SF3B3Q15393 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
SF3B3Q15393 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
SF3B3Q15393 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
SF3B3Q15393 Y_RNA.606-201ENST00000410579 103 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms