Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.12□□□□□ -2.07
NFX1Q12986 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
NFX1Q12986 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NFX1Q12986 Y_RNA.74-201ENST00000362911 99 ntBASIC2.11□□□□□ -2.07
NFX1Q12986 RNU6-172P-201ENST00000411000 93 ntBASIC2.11□□□□□ -2.07
NFX1Q12986 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
NFX1Q12986 MIR3937-201ENST00000580135 106 ntBASIC2.11□□□□□ -2.07
NFX1Q12986 AC138207.3-201ENST00000585289 166 ntBASIC2.11□□□□□ -2.07
NFX1Q12986 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NFX1Q12986 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NFX1Q12986 RNU6-822P-201ENST00000362707 106 ntBASIC2.1□□□□□ -2.07
NFX1Q12986 RNU6-1065P-201ENST00000384513 106 ntBASIC2.1□□□□□ -2.07
NFX1Q12986 RNU6-1053P-201ENST00000515930 101 ntBASIC2.1□□□□□ -2.07
NFX1Q12986 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NFX1Q12986 RNU1-123P-201ENST00000458950 160 ntBASIC2.09□□□□□ -2.07
NFX1Q12986 AC067863.3-201ENST00000624172 122 ntBASIC2.09□□□□□ -2.07
NFX1Q12986 SNORD1B-201ENST00000363091 84 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 RNU6-1204P-201ENST00000363948 107 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 SNORD113.3-201ENST00000364630 78 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 Y_RNA.282-201ENST00000364793 102 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 MIR527-201ENST00000385244 85 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NFX1Q12986 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 SNORA31.14-201ENST00000516728 116 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 MIR4460-201ENST00000577862 86 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 MIR4676-201ENST00000583078 72 ntBASIC2.08□□□□□ -2.08
NFX1Q12986 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.08□□□□□ -2.08
NFX1Q12986 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NFX1Q12986 Y_RNA.32-201ENST00000362589 110 ntBASIC2.07□□□□□ -2.08
NFX1Q12986 RNU6-246P-201ENST00000384702 107 ntBASIC2.07□□□□□ -2.08
NFX1Q12986 RNU7-102P-201ENST00000458948 62 ntBASIC2.07□□□□□ -2.08
NFX1Q12986 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
NFX1Q12986 AC027335.2-201ENST00000624030 375 ntBASIC2.07□□□□□ -2.08
NFX1Q12986 MIR938-201ENST00000401216 83 ntBASIC2.06□□□□□ -2.08
NFX1Q12986 MIR934-201ENST00000401241 83 ntBASIC2.06□□□□□ -2.08
NFX1Q12986 RPS26P5-201ENST00000418544 335 ntBASIC2.06□□□□□ -2.08
NFX1Q12986 AL021921.1-201ENST00000442774 93 ntBASIC2.06□□□□□ -2.08
NFX1Q12986 uc_338.16-201ENST00000621804 95 ntBASIC2.06□□□□□ -2.08
NFX1Q12986 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
NFX1Q12986 Y_RNA.174-201ENST00000363781 105 ntBASIC2.05□□□□□ -2.08
NFX1Q12986 Y_RNA.226-201ENST00000364337 114 ntBASIC2.05□□□□□ -2.08
NFX1Q12986 MIR758-201ENST00000390227 88 ntBASIC2.05□□□□□ -2.08
NFX1Q12986 MIR4422-201ENST00000581938 83 ntBASIC2.05□□□□□ -2.08
NFX1Q12986 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
NFX1Q12986 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NFX1Q12986 SNORD28-201ENST00000384706 75 ntBASIC2.04□□□□□ -2.08
NFX1Q12986 RNU1-78P-201ENST00000391248 165 ntBASIC2.04□□□□□ -2.08
NFX1Q12986 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
NFX1Q12986 MIR4498-201ENST00000577599 66 ntBASIC2.04□□□□□ -2.08
NFX1Q12986 MIR1287-201ENST00000408492 90 ntBASIC2.03□□□□□ -2.08
NFX1Q12986 SNORA31.2-201ENST00000516019 134 ntBASIC2.03□□□□□ -2.08
NFX1Q12986 CYP3A54P-201ENST00000566950 75 ntBASIC2.03□□□□□ -2.08
NFX1Q12986 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
NFX1Q12986 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
NFX1Q12986 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NFX1Q12986 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NFX1Q12986 SNORA63.6-201ENST00000364921 119 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 RNU6-742P-201ENST00000365289 107 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 RNU6-721P-201ENST00000410155 105 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 RNU6-1206P-201ENST00000516339 103 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 RNU7-40P-201ENST00000516397 64 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 AC036111.3-201ENST00000526389 112 ntBASIC2.02□□□□□ -2.09
NFX1Q12986 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
NFX1Q12986 RNA5SP190-201ENST00000365222 118 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 MIR517C-201ENST00000385103 95 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 RNU6-518P-201ENST00000516056 96 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 MIR3664-201ENST00000579074 99 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 MIR7111-201ENST00000619751 72 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.01□□□□□ -2.09
NFX1Q12986 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
NFX1Q12986 SNORD41.1-201ENST00000391000 69 ntBASIC2□□□□□ -2.09
NFX1Q12986 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
NFX1Q12986 RNU5B-6P-201ENST00000516765 68 ntBASIC2□□□□□ -2.09
NFX1Q12986 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
NFX1Q12986 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
NFX1Q12986 AC108667.1-201ENST00000428618 249 ntBASIC1.99□□□□□ -2.09
NFX1Q12986 AL512310.8-201ENST00000550183 120 ntBASIC1.99□□□□□ -2.09
NFX1Q12986 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NFX1Q12986 RNU1-141P-201ENST00000364623 158 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 RNU1-119P-201ENST00000391122 165 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 RNU7-160P-201ENST00000516660 62 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 RNA5SP94-201ENST00000516917 108 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 MIR4804-201ENST00000581683 73 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
NFX1Q12986 SNORA17.3-201ENST00000391159 129 ntBASIC1.97□□□□□ -2.09
NFX1Q12986 SNORD111-201ENST00000408139 94 ntBASIC1.97□□□□□ -2.09
NFX1Q12986 RNU7-56P-201ENST00000458744 62 ntBASIC1.97□□□□□ -2.09
NFX1Q12986 snoU13.31-201ENST00000607291 104 ntBASIC1.97□□□□□ -2.09
NFX1Q12986 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
NFX1Q12986 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NFX1Q12986 Y_RNA.118-201ENST00000363300 101 ntBASIC1.96□□□□□ -2.1
NFX1Q12986 RNU6-59P-201ENST00000384787 107 ntBASIC1.96□□□□□ -2.1
NFX1Q12986 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NFX1Q12986 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.96□□□□□ -2.1
NFX1Q12986 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
NFX1Q12986 MIR378A-201ENST00000362177 66 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 Y_RNA.69-201ENST00000362885 109 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 Y_RNA.109-201ENST00000363215 102 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms