Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RNU6-644P-201ENST00000391155 98 ntBASIC-0.28□□□□□ -2.45
CD47Q08722 MIR548M-201ENST00000408260 86 ntBASIC-0.28□□□□□ -2.45
CD47Q08722 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
CD47Q08722 RNU6-904P-201ENST00000516206 101 ntBASIC-0.28□□□□□ -2.45
CD47Q08722 MIR1295B-201ENST00000636144 60 ntBASIC-0.28□□□□□ -2.45
CD47Q08722 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
CD47Q08722 RNA5SP205-201ENST00000364653 136 ntBASIC-0.29□□□□□ -2.46
CD47Q08722 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.29□□□□□ -2.46
CD47Q08722 SNORD4B-201ENST00000459083 72 ntBASIC-0.29□□□□□ -2.46
CD47Q08722 RNU6-811P-201ENST00000384069 107 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CD47Q08722 AC008267.6-201ENST00000441664 139 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 SNORD42B-201ENST00000458893 67 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 FGF7P7-201ENST00000514120 227 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 RNU6-412P-201ENST00000516434 106 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 RNU6-537P-201ENST00000517277 103 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 MIR3140-201ENST00000583685 90 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 MIR6129-201ENST00000616087 109 ntBASIC-0.3□□□□□ -2.46
CD47Q08722 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 RNU6-476P-201ENST00000384726 107 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 MIR590-201ENST00000385008 97 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.31□□□□□ -2.46
CD47Q08722 SCARNA23-201ENST00000516060 130 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 MIR3064-201ENST00000581130 66 ntBASIC-0.31□□□□□ -2.46
CD47Q08722 MIR20A-201ENST00000362279 71 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 RNA5SP98-201ENST00000363158 137 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 MIR582-201ENST00000365731 98 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 SNORA19-201ENST00000384737 128 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 SNORA49-201ENST00000386157 136 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 MIR216B-201ENST00000390186 82 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 RNA5SP292-201ENST00000390974 118 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 SNORD90-201ENST00000391145 111 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 RNA5SP480-201ENST00000516840 109 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 MIR2909-201ENST00000617113 69 ntBASIC-0.32□□□□□ -2.46
CD47Q08722 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.33□□□□□ -2.46
CD47Q08722 RNU6-554P-201ENST00000410466 106 ntBASIC-0.33□□□□□ -2.46
CD47Q08722 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.33□□□□□ -2.46
CD47Q08722 AC097510.1-201ENST00000510945 133 ntBASIC-0.33□□□□□ -2.46
CD47Q08722 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.33□□□□□ -2.46
CD47Q08722 RNU6-302P-201ENST00000365249 107 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 SNORD58A-201ENST00000383875 65 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 RNU6-22P-201ENST00000384355 107 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 RNU6-106P-201ENST00000384405 107 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 U3.27-201ENST00000391237 200 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 AC244090.1-201ENST00000441884 93 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.34□□□□□ -2.46
CD47Q08722 RNU6-109P-201ENST00000516364 107 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 RNU6-184P-201ENST00000516514 107 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 AC104996.3-201ENST00000590718 94 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 AC145423.2-201ENST00000610631 239 ntBASIC-0.34□□□□□ -2.46
CD47Q08722 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.35□□□□□ -2.47
CD47Q08722 RNU6-519P-201ENST00000410590 108 ntBASIC-0.35□□□□□ -2.47
CD47Q08722 MIR3666-201ENST00000607845 111 ntBASIC-0.35□□□□□ -2.47
CD47Q08722 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 MIR548E-201ENST00000408287 88 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 RNU7-61P-201ENST00000515897 61 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 AP000676.1-201ENST00000533307 52 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
CD47Q08722 SNORA63.2-201ENST00000362603 126 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 SNORA24B-201ENST00000384176 131 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 RNU6-455P-201ENST00000384681 107 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 MIR548U-201ENST00000390728 81 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 RNU6-887P-201ENST00000410660 100 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 RNU6-589P-201ENST00000516485 107 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 AC026421.1-201ENST00000519101 163 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 MIR3910-1-201ENST00000580936 111 ntBASIC-0.37□□□□□ -2.47
CD47Q08722 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.37□□□□□ -2.47
CD47Q08722 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CD47Q08722 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 MIR9-2-201ENST00000384838 87 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 RNU6-972P-201ENST00000391208 107 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 MIR1302-5-201ENST00000408164 150 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 SNORA18.5-201ENST00000516616 101 ntBASIC-0.38□□□□□ -2.47
CD47Q08722 RNU4-32P-201ENST00000363404 141 ntBASIC-0.39□□□□□ -2.47
CD47Q08722 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.39□□□□□ -2.47
CD47Q08722 AL109933.3-201ENST00000619095 188 ntBASIC-0.39□□□□□ -2.47
CD47Q08722 MIR7111-201ENST00000619751 72 ntBASIC-0.39□□□□□ -2.47
CD47Q08722 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
CD47Q08722 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.4□□□□□ -2.47
CD47Q08722 RNU6-162P-201ENST00000516228 103 ntBASIC-0.4□□□□□ -2.47
CD47Q08722 RNU6-495P-201ENST00000362995 107 ntBASIC-0.41□□□□□ -2.48
CD47Q08722 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
CD47Q08722 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.41□□□□□ -2.48
CD47Q08722 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.41□□□□□ -2.48
CD47Q08722 RNU6-62P-201ENST00000516526 102 ntBASIC-0.41□□□□□ -2.48
CD47Q08722 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.42□□□□□ -2.48
CD47Q08722 U7.3-201ENST00000616123 62 ntBASIC-0.42□□□□□ -2.48
CD47Q08722 AC132825.6-201ENST00000638861 357 ntBASIC-0.42□□□□□ -2.48
CD47Q08722 SNORD115-25-201ENST00000362619 82 ntBASIC-0.43□□□□□ -2.48
CD47Q08722 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.43□□□□□ -2.48
CD47Q08722 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms