Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 RNU6-411P-201ENST00000384451 107 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU6-380P-201ENST00000410207 107 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU2-59P-201ENST00000410482 191 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU6-1223P-201ENST00000517124 104 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SRSF4Q08170 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNY4P3-201ENST00000365254 95 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 MIR519E-201ENST00000385075 84 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 U3.27-201ENST00000391237 200 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU7-13P-201ENST00000516413 62 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU6-70P-201ENST00000516438 60 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU6-807P-201ENST00000516805 107 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD18A-201ENST00000363753 72 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 MIR598-201ENST00000384868 97 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 RNU7-104P-201ENST00000459398 79 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SRSF4Q08170 AC244669.1-204ENST00000621564 178 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 Y_RNA.205-201ENST00000364128 113 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 MIR617-201ENST00000385030 97 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 SNORD41.1-201ENST00000391000 69 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 RNU6-1177P-201ENST00000391058 104 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC093423.1-201ENST00000440817 142 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC114801.3-201ENST00000510231 177 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 RNU6-382P-201ENST00000365181 106 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 MIR573-201ENST00000384964 99 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNU6-726P-201ENST00000364680 107 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 SNORD115-31-201ENST00000365318 82 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-587P-201ENST00000391282 106 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-634P-201ENST00000459134 106 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 Y_RNA.681-201ENST00000516445 113 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR3678-201ENST00000578455 94 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR4639-201ENST00000584938 69 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR548O2-201ENST00000616090 70 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-1241P-201ENST00000384536 107 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 RNU6-540P-201ENST00000384622 101 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 RNU6-495P-201ENST00000362995 107 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 SNORA8.1-201ENST00000384250 140 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 RNU6-788P-201ENST00000390967 104 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR3675-201ENST00000583661 73 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR6828-201ENST00000636181 60 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORA36.1-201ENST00000363424 132 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-681P-201ENST00000364012 104 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD115-22-201ENST00000364456 82 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-54P-201ENST00000365563 107 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 Y_RNA.386-201ENST00000383913 105 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU7-24P-201ENST00000458867 62 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD42B-201ENST00000458893 67 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 NAMPTP3-201ENST00000569273 224 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD75.2-201ENST00000408784 58 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
SRSF4Q08170 RNU6-539P-201ENST00000516665 103 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORA40.17-201ENST00000517256 115 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 RNU6-269P-201ENST00000391077 97 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 SCARNA16.5-201ENST00000517114 183 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 AC025627.3-201ENST00000582078 182 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 Y_RNA.374-201ENST00000365606 101 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU6-716P-201ENST00000365621 103 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 AC011195.1-201ENST00000578177 177 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU1-141P-201ENST00000364623 158 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SRSF4Q08170 RNU6V-201ENST00000384105 107 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 SNORD45A-201ENST00000384512 84 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 MT-TY-201ENST00000387409 66 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms