Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 RNU6-411P-201ENST00000384451 107 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU6-380P-201ENST00000410207 107 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU2-59P-201ENST00000410482 191 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 RNU6-1223P-201ENST00000517124 104 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
SRSF4Q08170 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SRSF4Q08170 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNY4P3-201ENST00000365254 95 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 MIR519E-201ENST00000385075 84 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 U3.27-201ENST00000391237 200 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU7-13P-201ENST00000516413 62 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU6-70P-201ENST00000516438 60 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNU6-807P-201ENST00000516805 107 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
SRSF4Q08170 SNORD18A-201ENST00000363753 72 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 MIR598-201ENST00000384868 97 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 RNU7-104P-201ENST00000459398 79 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SRSF4Q08170 AC244669.1-204ENST00000621564 178 ntBASIC0.92□□□□□ -2.26
SRSF4Q08170 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 Y_RNA.205-201ENST00000364128 113 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 MIR617-201ENST00000385030 97 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 SNORD41.1-201ENST00000391000 69 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 RNU6-1177P-201ENST00000391058 104 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC093423.1-201ENST00000440817 142 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 AC114801.3-201ENST00000510231 177 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.91□□□□□ -2.26
SRSF4Q08170 RNU6-382P-201ENST00000365181 106 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 MIR573-201ENST00000384964 99 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.9□□□□□ -2.27
SRSF4Q08170 RNU6-726P-201ENST00000364680 107 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 SNORD115-31-201ENST00000365318 82 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-587P-201ENST00000391282 106 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-634P-201ENST00000459134 106 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 Y_RNA.681-201ENST00000516445 113 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR3678-201ENST00000578455 94 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR4639-201ENST00000584938 69 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 MIR548O2-201ENST00000616090 70 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
SRSF4Q08170 RNU6-1241P-201ENST00000384536 107 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 RNU6-540P-201ENST00000384622 101 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
SRSF4Q08170 RNU6-495P-201ENST00000362995 107 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 SNORA8.1-201ENST00000384250 140 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
SRSF4Q08170 RNU6-788P-201ENST00000390967 104 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR3675-201ENST00000583661 73 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR6828-201ENST00000636181 60 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
SRSF4Q08170 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
SRSF4Q08170 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORA36.1-201ENST00000363424 132 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-681P-201ENST00000364012 104 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD115-22-201ENST00000364456 82 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-54P-201ENST00000365563 107 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 Y_RNA.386-201ENST00000383913 105 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU7-24P-201ENST00000458867 62 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 SNORD42B-201ENST00000458893 67 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 NAMPTP3-201ENST00000569273 224 ntBASIC0.85□□□□□ -2.27
SRSF4Q08170 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD75.2-201ENST00000408784 58 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
SRSF4Q08170 RNU6-539P-201ENST00000516665 103 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORA40.17-201ENST00000517256 115 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
SRSF4Q08170 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 RNU6-269P-201ENST00000391077 97 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 SCARNA16.5-201ENST00000517114 183 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 AC025627.3-201ENST00000582078 182 ntBASIC0.83□□□□□ -2.28
SRSF4Q08170 Y_RNA.374-201ENST00000365606 101 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU6-716P-201ENST00000365621 103 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 AC011195.1-201ENST00000578177 177 ntBASIC0.82□□□□□ -2.28
SRSF4Q08170 RNU1-141P-201ENST00000364623 158 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SRSF4Q08170 RNU6V-201ENST00000384105 107 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 SNORD45A-201ENST00000384512 84 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 MT-TY-201ENST00000387409 66 ntBASIC0.81□□□□□ -2.28
SRSF4Q08170 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms