Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 SNORD115-44-201ENST00000365391 82 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
NFKB2Q00653 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NFKB2Q00653 RNA5SP215-201ENST00000363440 122 ntBASIC1.53□□□□□ -2.16
NFKB2Q00653 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NFKB2Q00653 RNU4-88P-201ENST00000411220 86 ntBASIC1.53□□□□□ -2.16
NFKB2Q00653 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.53□□□□□ -2.16
NFKB2Q00653 MIR203A-201ENST00000384836 110 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 RNU7-90P-201ENST00000459216 62 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 NAMPTP3-201ENST00000569273 224 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 RNU6-92P-201ENST00000605893 104 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 MIR6515-201ENST00000619843 57 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 AC027335.2-201ENST00000624030 375 ntBASIC1.52□□□□□ -2.17
NFKB2Q00653 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NFKB2Q00653 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NFKB2Q00653 SNORD114-26-201ENST00000363543 72 ntBASIC1.51□□□□□ -2.17
NFKB2Q00653 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
NFKB2Q00653 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
NFKB2Q00653 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
NFKB2Q00653 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
NFKB2Q00653 Y_RNA.379-201ENST00000365653 102 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 MIR216B-201ENST00000390186 82 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 AC244505.6-201ENST00000452829 130 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 snoU13.21-201ENST00000459368 105 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
NFKB2Q00653 MIR3657-201ENST00000584818 117 ntBASIC1.5□□□□□ -2.17
NFKB2Q00653 SNORD60.1-201ENST00000362451 73 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 RNU6-302P-201ENST00000365249 107 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 RNU6-535P-201ENST00000384722 107 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 MIR125B2-201ENST00000385128 89 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 SNORD83.1-201ENST00000411362 77 ntBASIC1.49□□□□□ -2.17
NFKB2Q00653 MIR96-201ENST00000362288 78 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 RNU6-1312P-201ENST00000362425 108 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 SNORA75.1-201ENST00000391130 148 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 AC002429.1-201ENST00000437672 148 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 RNU7-13P-201ENST00000516413 62 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 RNU6-1089P-201ENST00000516473 104 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 MIR4421-201ENST00000578133 69 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 AC022709.1-201ENST00000615967 87 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 PVT1_3.1-201ENST00000620853 95 ntBASIC1.48□□□□□ -2.17
NFKB2Q00653 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NFKB2Q00653 SNORA2.1-201ENST00000363089 137 ntBASIC1.47□□□□□ -2.17
NFKB2Q00653 RNU6-934P-201ENST00000365154 107 ntBASIC1.47□□□□□ -2.17
NFKB2Q00653 RNU6-260P-201ENST00000384092 107 ntBASIC1.47□□□□□ -2.17
NFKB2Q00653 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
NFKB2Q00653 AC008608.1-201ENST00000603910 127 ntBASIC1.47□□□□□ -2.17
NFKB2Q00653 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NFKB2Q00653 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
NFKB2Q00653 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
NFKB2Q00653 Y_RNA.374-201ENST00000365606 101 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 RNU6-1126P-201ENST00000384002 107 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 RNU6-656P-201ENST00000516785 107 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 MIR548AG2-201ENST00000581228 64 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 MIR548O2-201ENST00000616090 70 ntBASIC1.46□□□□□ -2.18
NFKB2Q00653 SNORD113.3-201ENST00000364630 78 ntBASIC1.45□□□□□ -2.18
NFKB2Q00653 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
NFKB2Q00653 MIR4771-2-201ENST00000577758 74 ntBASIC1.45□□□□□ -2.18
NFKB2Q00653 MIR4771-1-201ENST00000582617 74 ntBASIC1.45□□□□□ -2.18
NFKB2Q00653 MIR548V-201ENST00000584165 80 ntBASIC1.45□□□□□ -2.18
NFKB2Q00653 RNU6-753P-201ENST00000363926 107 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 SNORD111-201ENST00000408139 94 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 uc_338.10-201ENST00000621872 182 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 MIR6739-201ENST00000622461 75 ntBASIC1.44□□□□□ -2.18
NFKB2Q00653 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 RNU6-54P-201ENST00000365563 107 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 RNU6-520P-201ENST00000384717 104 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 MIR617-201ENST00000385030 97 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 AC106800.4-201ENST00000614905 153 ntBASIC1.43□□□□□ -2.18
NFKB2Q00653 RNA5SP403-201ENST00000363598 108 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 RNU1-124P-201ENST00000363861 145 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 SNORD42B-201ENST00000458893 67 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 RPS29P1-201ENST00000465274 159 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 SNORA40.17-201ENST00000517256 115 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 MIR548AD-201ENST00000584780 82 ntBASIC1.42□□□□□ -2.18
NFKB2Q00653 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
NFKB2Q00653 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NFKB2Q00653 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
NFKB2Q00653 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
NFKB2Q00653 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
NFKB2Q00653 RNA5SP147-201ENST00000516493 109 ntBASIC1.41□□□□□ -2.18
NFKB2Q00653 MIR4676-201ENST00000583078 72 ntBASIC1.41□□□□□ -2.18
NFKB2Q00653 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
NFKB2Q00653 MIR630-201ENST00000384957 97 ntBASIC1.4□□□□□ -2.19
NFKB2Q00653 MIR519E-201ENST00000385075 84 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 277.7 ms