Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD41.1-201ENST00000391000 69 ntBASIC1.75□□□□□ -2.13
USP46P62068 SNORA40.6-201ENST00000391153 128 ntBASIC1.75□□□□□ -2.13
USP46P62068 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
USP46P62068 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
USP46P62068 AC073869.9-201ENST00000641610 120 ntBASIC1.75□□□□□ -2.13
USP46P62068 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USP46P62068 RNA5SP147-201ENST00000516493 109 ntBASIC1.74□□□□□ -2.13
USP46P62068 MIR3678-201ENST00000578455 94 ntBASIC1.74□□□□□ -2.13
USP46P62068 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
USP46P62068 MTND4LP19-201ENST00000403051 166 ntBASIC1.73□□□□□ -2.13
USP46P62068 SNORD124-201ENST00000459577 104 ntBASIC1.73□□□□□ -2.13
USP46P62068 RNA5SP47-201ENST00000517230 109 ntBASIC1.73□□□□□ -2.13
USP46P62068 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
USP46P62068 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
USP46P62068 MT-TY-201ENST00000387409 66 ntBASIC1.72□□□□□ -2.13
USP46P62068 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
USP46P62068 MIR3612-201ENST00000579753 87 ntBASIC1.72□□□□□ -2.13
USP46P62068 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USP46P62068 RNU6-645P-201ENST00000364649 106 ntBASIC1.71□□□□□ -2.14
USP46P62068 MIR573-201ENST00000384964 99 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.71□□□□□ -2.14
USP46P62068 RNU6-990P-201ENST00000364385 104 ntBASIC1.7□□□□□ -2.14
USP46P62068 RNU6-1335P-201ENST00000365426 107 ntBASIC1.7□□□□□ -2.14
USP46P62068 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
USP46P62068 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
USP46P62068 RNU1-141P-201ENST00000364623 158 ntBASIC1.69□□□□□ -2.14
USP46P62068 MIR7-2-201ENST00000384970 110 ntBASIC1.69□□□□□ -2.14
USP46P62068 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
USP46P62068 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
USP46P62068 RNU6-499P-201ENST00000365615 107 ntBASIC1.68□□□□□ -2.14
USP46P62068 MIR200A-201ENST00000384875 90 ntBASIC1.68□□□□□ -2.14
USP46P62068 RNU6-269P-201ENST00000391077 97 ntBASIC1.68□□□□□ -2.14
USP46P62068 RNA5SP247-201ENST00000411181 105 ntBASIC1.68□□□□□ -2.14
USP46P62068 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
USP46P62068 MIR19B1-201ENST00000384829 87 ntBASIC1.67□□□□□ -2.14
USP46P62068 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
USP46P62068 RNU6-1053P-201ENST00000515930 101 ntBASIC1.67□□□□□ -2.14
USP46P62068 SCARNA16.5-201ENST00000517114 183 ntBASIC1.67□□□□□ -2.14
USP46P62068 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
USP46P62068 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USP46P62068 SNORA2.1-201ENST00000363089 137 ntBASIC1.66□□□□□ -2.14
USP46P62068 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
USP46P62068 AC110620.1-201ENST00000416042 228 ntBASIC1.66□□□□□ -2.14
USP46P62068 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
USP46P62068 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
USP46P62068 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
USP46P62068 RNA5SP484-201ENST00000458857 111 ntBASIC1.64□□□□□ -2.15
USP46P62068 RNU6-542P-201ENST00000516405 103 ntBASIC1.64□□□□□ -2.15
USP46P62068 SNORA8.2-201ENST00000384372 139 ntBASIC1.63□□□□□ -2.15
USP46P62068 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
USP46P62068 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
USP46P62068 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
USP46P62068 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
USP46P62068 SNORD114-4-201ENST00000363962 75 ntBASIC1.62□□□□□ -2.15
USP46P62068 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
USP46P62068 AC011195.1-201ENST00000578177 177 ntBASIC1.62□□□□□ -2.15
USP46P62068 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.62□□□□□ -2.15
USP46P62068 Y_RNA.375-201ENST00000365625 101 ntBASIC1.61□□□□□ -2.15
USP46P62068 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
USP46P62068 RNA5SP227-201ENST00000516184 113 ntBASIC1.61□□□□□ -2.15
USP46P62068 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
USP46P62068 SNORA40.17-201ENST00000517256 115 ntBASIC1.6□□□□□ -2.15
USP46P62068 AC018659.1-201ENST00000551083 169 ntBASIC1.6□□□□□ -2.15
USP46P62068 SNORD114-24-201ENST00000365029 72 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORD26-201ENST00000384147 75 ntBASIC1.59□□□□□ -2.15
USP46P62068 MIR633-201ENST00000384821 98 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
USP46P62068 SNORD99-201ENST00000408612 74 ntBASIC1.59□□□□□ -2.15
USP46P62068 snoU13.13-201ENST00000458842 104 ntBASIC1.59□□□□□ -2.15
USP46P62068 RNU6-656P-201ENST00000516785 107 ntBASIC1.59□□□□□ -2.15
USP46P62068 AC092634.7-201ENST00000621022 103 ntBASIC1.59□□□□□ -2.15
USP46P62068 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
USP46P62068 MIR548C-201ENST00000384815 97 ntBASIC1.58□□□□□ -2.16
USP46P62068 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
USP46P62068 RNU6-669P-201ENST00000365575 107 ntBASIC1.57□□□□□ -2.16
USP46P62068 RNU6-987P-201ENST00000384759 104 ntBASIC1.57□□□□□ -2.16
USP46P62068 RNA5SP255-201ENST00000516370 107 ntBASIC1.57□□□□□ -2.16
USP46P62068 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
USP46P62068 MIR18A-201ENST00000362310 71 ntBASIC1.56□□□□□ -2.16
USP46P62068 RNA5SP299-201ENST00000391203 116 ntBASIC1.56□□□□□ -2.16
USP46P62068 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
USP46P62068 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
USP46P62068 MIR6739-201ENST00000622461 75 ntBASIC1.56□□□□□ -2.16
USP46P62068 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
USP46P62068 RNU6-1162P-201ENST00000384443 104 ntBASIC1.55□□□□□ -2.16
USP46P62068 RNA5SP404-201ENST00000517118 132 ntBASIC1.55□□□□□ -2.16
USP46P62068 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
USP46P62068 MIR548V-201ENST00000584165 80 ntBASIC1.55□□□□□ -2.16
USP46P62068 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
USP46P62068 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USP46P62068 RNU4-37P-201ENST00000410214 84 ntBASIC1.54□□□□□ -2.16
USP46P62068 RNU6-321P-201ENST00000410912 106 ntBASIC1.54□□□□□ -2.16
USP46P62068 RNU6-1089P-201ENST00000516473 104 ntBASIC1.54□□□□□ -2.16
USP46P62068 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.54□□□□□ -2.16
USP46P62068 MIR6828-201ENST00000636181 60 ntBASIC1.54□□□□□ -2.16
USP46P62068 AC006210.1-201ENST00000424882 111 ntBASIC1.53□□□□□ -2.16
USP46P62068 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
USP46P62068 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.53□□□□□ -2.16
USP46P62068 MIR4473-201ENST00000583731 91 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms