Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 U3.27-201ENST00000391237 200 ntBASIC0.66□□□□□ -2.3
CLRN1P58418 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
CLRN1P58418 snoU13.17-201ENST00000458802 104 ntBASIC0.66□□□□□ -2.3
CLRN1P58418 RNU5F-1-201ENST00000362507 117 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 SNORD118-201ENST00000363593 134 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 RNU6-787P-201ENST00000384032 107 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 AL450471.1-201ENST00000447509 127 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 MIR4666B-201ENST00000578142 81 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
CLRN1P58418 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.65□□□□□ -2.31
CLRN1P58418 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CLRN1P58418 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 RNU1-141P-201ENST00000364623 158 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 Y_RNA.316-201ENST00000365118 111 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 RNU6-652P-201ENST00000365488 107 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 SNORD71-201ENST00000411292 86 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 RNA5SP484-201ENST00000458857 111 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR4752-201ENST00000579672 72 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR7111-201ENST00000619751 72 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 MIR1245B-201ENST00000636115 69 ntBASIC0.64□□□□□ -2.31
CLRN1P58418 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
CLRN1P58418 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
CLRN1P58418 MIR216B-201ENST00000390186 82 ntBASIC0.63□□□□□ -2.31
CLRN1P58418 RNU6-1108P-201ENST00000516308 104 ntBASIC0.63□□□□□ -2.31
CLRN1P58418 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
CLRN1P58418 NAMPTP3-201ENST00000569273 224 ntBASIC0.63□□□□□ -2.31
CLRN1P58418 RNU6-161P-201ENST00000363051 106 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 Y_RNA.219-201ENST00000364232 113 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 Y_RNA.313-201ENST00000365095 103 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 SNORA24B-201ENST00000384176 131 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 SNORD77.2-201ENST00000391045 68 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 MIR4460-201ENST00000577862 86 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 MIR3202-2-201ENST00000635980 79 ntBASIC0.62□□□□□ -2.31
CLRN1P58418 RNU6-208P-201ENST00000362431 107 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 RNU6-478P-201ENST00000363904 110 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 MIR489-201ENST00000384923 84 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 RNU6-129P-201ENST00000391022 107 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 AC022709.1-201ENST00000615967 87 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 MIR548O2-201ENST00000616090 70 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 AC073869.9-201ENST00000641610 120 ntBASIC0.61□□□□□ -2.31
CLRN1P58418 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
CLRN1P58418 RNU6-1124P-201ENST00000384169 107 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 MIR598-201ENST00000384868 97 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 MT-TY-201ENST00000387409 66 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.6□□□□□ -2.31
CLRN1P58418 RNU6-557P-201ENST00000516842 110 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 SNORA70.25-201ENST00000612741 95 ntBASIC0.6□□□□□ -2.31
CLRN1P58418 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
CLRN1P58418 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CLRN1P58418 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
CLRN1P58418 RNU2-59P-201ENST00000410482 191 ntBASIC0.59□□□□□ -2.31
CLRN1P58418 RNU6-228P-201ENST00000362700 106 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 RNU6V-201ENST00000384105 107 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CLRN1P58418 SNORD78.1-201ENST00000390866 65 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 RNU6-1177P-201ENST00000391058 104 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 AC006210.1-201ENST00000424882 111 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 Y_RNA.660-201ENST00000516002 120 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 RNU1-29P-201ENST00000606574 126 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 AC069503.3-201ENST00000618674 145 ntBASIC0.58□□□□□ -2.32
CLRN1P58418 Y_RNA.264-201ENST00000364665 102 ntBASIC0.57□□□□□ -2.32
CLRN1P58418 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
CLRN1P58418 AC097510.1-201ENST00000510945 133 ntBASIC0.57□□□□□ -2.32
CLRN1P58418 RNU5B-6P-201ENST00000516765 68 ntBASIC0.57□□□□□ -2.32
CLRN1P58418 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.57□□□□□ -2.32
CLRN1P58418 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CLRN1P58418 RNU6-686P-201ENST00000364839 107 ntBASIC0.56□□□□□ -2.32
CLRN1P58418 Y_RNA.423-201ENST00000384057 113 ntBASIC0.56□□□□□ -2.32
CLRN1P58418 MIR1255A-201ENST00000408338 113 ntBASIC0.56□□□□□ -2.32
CLRN1P58418 YWHAEP2-201ENST00000580066 112 ntBASIC0.56□□□□□ -2.32
CLRN1P58418 RNU6-824P-201ENST00000363724 104 ntBASIC0.55□□□□□ -2.32
CLRN1P58418 RNU6-54P-201ENST00000365563 107 ntBASIC0.55□□□□□ -2.32
CLRN1P58418 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
CLRN1P58418 MIR4712-201ENST00000583750 82 ntBASIC0.55□□□□□ -2.32
CLRN1P58418 MIRLET7A1-201ENST00000362295 80 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 Y_RNA.12-201ENST00000362393 112 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 RNU6-315P-201ENST00000362666 107 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 Y_RNA.371-201ENST00000365591 113 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
CLRN1P58418 Y_RNA.94-201ENST00000363068 106 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
CLRN1P58418 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 MIR5706-201ENST00000579841 80 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 MIR6755-201ENST00000619993 66 ntBASIC0.53□□□□□ -2.32
CLRN1P58418 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
CLRN1P58418 MIR4714-201ENST00000580728 77 ntBASIC0.52□□□□□ -2.33
CLRN1P58418 YWHAEP3-201ENST00000582767 121 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 293.4 ms