Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC025521.1-201ENST00000621624 286 ntBASIC-0.83□□□□□ -2.54
PKNOX1P55347 MIR548E-201ENST00000408287 88 ntBASIC-0.84□□□□□ -2.54
PKNOX1P55347 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.84□□□□□ -2.54
PKNOX1P55347 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.84□□□□□ -2.54
PKNOX1P55347 AC097510.1-201ENST00000510945 133 ntBASIC-0.85□□□□□ -2.55
PKNOX1P55347 RNU6-86P-201ENST00000606534 107 ntBASIC-0.85□□□□□ -2.55
PKNOX1P55347 MIR6851-201ENST00000617060 67 ntBASIC-0.85□□□□□ -2.55
PKNOX1P55347 AC099654.10-201ENST00000640395 161 ntBASIC-0.85□□□□□ -2.55
PKNOX1P55347 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 RNY4P3-201ENST00000365254 95 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 MIR204-201ENST00000385200 110 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 U3.27-201ENST00000391237 200 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 SNORD42B-201ENST00000458893 67 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 SNORD38.3-201ENST00000516599 73 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 SNORA40.17-201ENST00000517256 115 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 MTND5P41-201ENST00000517498 206 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 MIR3681-201ENST00000580089 72 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.86□□□□□ -2.55
PKNOX1P55347 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.86□□□□□ -2.55
PKNOX1P55347 RNU6-30P-201ENST00000384561 107 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 SNORD2-201ENST00000459163 69 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 RNU6-426P-201ENST00000516464 97 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 MIR4694-201ENST00000578534 80 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 AL035470.1-201ENST00000622571 220 ntBASIC-0.87□□□□□ -2.55
PKNOX1P55347 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.88□□□□□ -2.55
PKNOX1P55347 SNORD114-15-201ENST00000364687 72 ntBASIC-0.88□□□□□ -2.55
PKNOX1P55347 SNORD50.2-201ENST00000365465 70 ntBASIC-0.88□□□□□ -2.55
PKNOX1P55347 RNU6-832P-201ENST00000363319 107 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 RNU7-85P-201ENST00000458851 63 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 AC021146.6-201ENST00000514659 117 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 RNU6-65P-201ENST00000516332 98 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 MIR4719-201ENST00000585233 84 ntBASIC-0.89□□□□□ -2.55
PKNOX1P55347 SNORD114-4-201ENST00000363962 75 ntBASIC-0.9□□□□□ -2.55
PKNOX1P55347 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.9□□□□□ -2.55
PKNOX1P55347 RNU6-772P-201ENST00000516042 105 ntBASIC-0.9□□□□□ -2.55
PKNOX1P55347 AL513043.2-201ENST00000573941 143 ntBASIC-0.9□□□□□ -2.55
PKNOX1P55347 MIR4536-1-201ENST00000583537 88 ntBASIC-0.9□□□□□ -2.55
PKNOX1P55347 RNU6-502P-201ENST00000362419 108 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 RNU6-973P-201ENST00000364690 107 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 RNU6-476P-201ENST00000384726 107 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 MTND4LP9-201ENST00000427694 174 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 MIR3613-201ENST00000579844 87 ntBASIC-0.91□□□□□ -2.56
PKNOX1P55347 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 SNORA13-201ENST00000458790 133 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 FGF7P7-201ENST00000514120 227 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 RNU6-719P-201ENST00000516671 104 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 MIR4679-2-201ENST00000578358 77 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 MIR548AX-201ENST00000580117 73 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 AL353621.2-201ENST00000605340 133 ntBASIC-0.92□□□□□ -2.56
PKNOX1P55347 RNY3P2-201ENST00000362918 102 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 RNU6-132P-201ENST00000383863 107 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 RNU6-886P-201ENST00000384319 105 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 snoU13.19-201ENST00000459148 104 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 RNU6-881P-201ENST00000516813 102 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 RNU6-182P-201ENST00000516970 105 ntBASIC-0.93□□□□□ -2.56
PKNOX1P55347 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.94□□□□□ -2.56
PKNOX1P55347 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.94□□□□□ -2.56
PKNOX1P55347 RNU6-721P-201ENST00000410155 105 ntBASIC-0.95□□□□□ -2.56
PKNOX1P55347 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.95□□□□□ -2.56
PKNOX1P55347 MIR5704-201ENST00000584029 77 ntBASIC-0.95□□□□□ -2.56
PKNOX1P55347 AL157777.2-201ENST00000258070 137 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 RNY1P7-201ENST00000384743 110 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 AC068339.1-201ENST00000526965 141 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 MIR4439-201ENST00000583746 80 ntBASIC-0.96□□□□□ -2.56
PKNOX1P55347 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.96□□□□□ -2.56
PKNOX1P55347 MIR518B-201ENST00000385127 83 ntBASIC-0.97□□□□□ -2.56
PKNOX1P55347 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
PKNOX1P55347 SNORA63.2-201ENST00000362603 126 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR196A1-201ENST00000388006 70 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
PKNOX1P55347 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3179-1-201ENST00000578940 84 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3179-2-201ENST00000579107 84 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3179-3-201ENST00000579566 84 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3064-201ENST00000581130 66 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3140-201ENST00000583685 90 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 MIR3179-4-201ENST00000617599 84 ntBASIC-0.98□□□□□ -2.57
PKNOX1P55347 RNU6-495P-201ENST00000362995 107 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 SNORD114-25-201ENST00000363742 72 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 RNU4-36P-201ENST00000364294 144 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 SNORA40-201ENST00000388090 126 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 RNU6-257P-201ENST00000410238 98 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 RNU7-107P-201ENST00000459121 61 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 SNORD22.1-201ENST00000516331 125 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 MIR6773-201ENST00000612812 74 ntBASIC-0.99□□□□□ -2.57
PKNOX1P55347 Y_RNA.95-201ENST00000363079 95 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 SNORD45B-201ENST00000364617 72 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 SNORA63.6-201ENST00000364921 119 ntBASIC-1□□□□□ -2.57
PKNOX1P55347 SNORA24B-201ENST00000384176 131 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms