Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR936-201ENST00000401264 98 ntBASIC0.27□□□□□ -2.37
CDH12P55289 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
CDH12P55289 RNU7-129P-201ENST00000516128 62 ntBASIC0.27□□□□□ -2.37
CDH12P55289 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CDH12P55289 SNORA18.5-201ENST00000516616 101 ntBASIC0.27□□□□□ -2.37
CDH12P55289 AC069503.3-201ENST00000618674 145 ntBASIC0.27□□□□□ -2.37
CDH12P55289 SNORA9.1-201ENST00000362412 131 ntBASIC0.26□□□□□ -2.37
CDH12P55289 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
CDH12P55289 SNORD115-27-201ENST00000364430 82 ntBASIC0.26□□□□□ -2.37
CDH12P55289 SNORD90-201ENST00000391145 111 ntBASIC0.26□□□□□ -2.37
CDH12P55289 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
CDH12P55289 MIR4668-201ENST00000582284 70 ntBASIC0.26□□□□□ -2.37
CDH12P55289 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.26□□□□□ -2.37
CDH12P55289 MIR499B-201ENST00000636498 73 ntBASIC0.26□□□□□ -2.37
CDH12P55289 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
CDH12P55289 MIR598-201ENST00000384868 97 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNU6-1052P-201ENST00000411398 104 ntBASIC0.25□□□□□ -2.37
CDH12P55289 FGF7P7-201ENST00000514120 227 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNA5SP436-201ENST00000516020 115 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNU6-719P-201ENST00000516671 104 ntBASIC0.25□□□□□ -2.37
CDH12P55289 RNU5B-6P-201ENST00000516765 68 ntBASIC0.25□□□□□ -2.37
CDH12P55289 YWHAEP2-201ENST00000580066 112 ntBASIC0.25□□□□□ -2.37
CDH12P55289 MIR3140-201ENST00000583685 90 ntBASIC0.25□□□□□ -2.37
CDH12P55289 MIR548O2-201ENST00000616090 70 ntBASIC0.25□□□□□ -2.37
CDH12P55289 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
CDH12P55289 RNU6-127P-201ENST00000390897 107 ntBASIC0.24□□□□□ -2.37
CDH12P55289 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
CDH12P55289 RNY4P30-201ENST00000410216 95 ntBASIC0.24□□□□□ -2.37
CDH12P55289 RNU6-219P-201ENST00000364728 107 ntBASIC0.23□□□□□ -2.37
CDH12P55289 Y_RNA.355-201ENST00000365462 98 ntBASIC0.23□□□□□ -2.37
CDH12P55289 SNORD116-22-201ENST00000384430 92 ntBASIC0.23□□□□□ -2.37
CDH12P55289 MIR216B-201ENST00000390186 82 ntBASIC0.23□□□□□ -2.37
CDH12P55289 RNU6-402P-201ENST00000410678 103 ntBASIC0.23□□□□□ -2.37
CDH12P55289 Y_RNA.620-201ENST00000411009 88 ntBASIC0.23□□□□□ -2.37
CDH12P55289 RNU7-153P-201ENST00000516455 62 ntBASIC0.23□□□□□ -2.37
CDH12P55289 Y_RNA.694-201ENST00000516677 117 ntBASIC0.23□□□□□ -2.37
CDH12P55289 RNU6-844P-201ENST00000517175 102 ntBASIC0.23□□□□□ -2.37
CDH12P55289 MIR4473-201ENST00000583731 91 ntBASIC0.23□□□□□ -2.37
CDH12P55289 MIR4677-201ENST00000584153 80 ntBASIC0.23□□□□□ -2.37
CDH12P55289 MIR548AD-201ENST00000584780 82 ntBASIC0.23□□□□□ -2.37
CDH12P55289 U7.6-201ENST00000610841 64 ntBASIC0.23□□□□□ -2.37
CDH12P55289 SNORA63.2-201ENST00000362603 126 ntBASIC0.22□□□□□ -2.37
CDH12P55289 RNU6-633P-201ENST00000362612 103 ntBASIC0.22□□□□□ -2.37
CDH12P55289 SNORD114-23-201ENST00000363536 72 ntBASIC0.22□□□□□ -2.37
CDH12P55289 RNU6-1051P-201ENST00000365471 102 ntBASIC0.22□□□□□ -2.37
CDH12P55289 RNU6V-201ENST00000384105 107 ntBASIC0.22□□□□□ -2.37
CDH12P55289 MIR1236-201ENST00000408340 102 ntBASIC0.22□□□□□ -2.37
CDH12P55289 RNU6-267P-201ENST00000516714 103 ntBASIC0.22□□□□□ -2.37
CDH12P55289 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CDH12P55289 Y_RNA.558-201ENST00000384685 113 ntBASIC0.21□□□□□ -2.38
CDH12P55289 SNORA25.13-201ENST00000516395 103 ntBASIC0.21□□□□□ -2.38
CDH12P55289 MIR4796-201ENST00000580742 81 ntBASIC0.21□□□□□ -2.38
CDH12P55289 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CDH12P55289 MIR548AE1-201ENST00000583292 70 ntBASIC0.21□□□□□ -2.38
CDH12P55289 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
CDH12P55289 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
CDH12P55289 SNORA24B-201ENST00000384176 131 ntBASIC0.2□□□□□ -2.38
CDH12P55289 MIR519C-201ENST00000385053 87 ntBASIC0.2□□□□□ -2.38
CDH12P55289 RNU6-497P-201ENST00000365316 104 ntBASIC0.19□□□□□ -2.38
CDH12P55289 RNU6-54P-201ENST00000365563 107 ntBASIC0.19□□□□□ -2.38
CDH12P55289 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
CDH12P55289 AC010487.4-201ENST00000637027 61 ntBASIC0.19□□□□□ -2.38
CDH12P55289 RNU6-1298P-201ENST00000362456 101 ntBASIC0.18□□□□□ -2.38
CDH12P55289 MIR643-201ENST00000385267 97 ntBASIC0.18□□□□□ -2.38
CDH12P55289 MTATP6P29-201ENST00000415057 132 ntBASIC0.18□□□□□ -2.38
CDH12P55289 Y_RNA.17-201ENST00000362433 111 ntBASIC0.17□□□□□ -2.38
CDH12P55289 RNU6-1134P-201ENST00000365156 101 ntBASIC0.17□□□□□ -2.38
CDH12P55289 Y_RNA.437-201ENST00000384113 113 ntBASIC0.17□□□□□ -2.38
CDH12P55289 RNU6-675P-201ENST00000384236 104 ntBASIC0.17□□□□□ -2.38
CDH12P55289 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
CDH12P55289 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
CDH12P55289 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
CDH12P55289 MIR5582-201ENST00000579697 68 ntBASIC0.17□□□□□ -2.38
CDH12P55289 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
CDH12P55289 RNY4P3-201ENST00000365254 95 ntBASIC0.16□□□□□ -2.38
CDH12P55289 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
CDH12P55289 MIR516B1-201ENST00000385211 90 ntBASIC0.16□□□□□ -2.38
CDH12P55289 MIR548H2-201ENST00000408874 88 ntBASIC0.16□□□□□ -2.38
CDH12P55289 Y_RNA.593-201ENST00000410292 98 ntBASIC0.16□□□□□ -2.38
CDH12P55289 uc_338.10-201ENST00000621872 182 ntBASIC0.16□□□□□ -2.38
CDH12P55289 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
CDH12P55289 snoU13.17-201ENST00000458802 104 ntBASIC0.15□□□□□ -2.39
CDH12P55289 RN7SL793P-201ENST00000583259 296 ntBASIC0.15□□□□□ -2.39
CDH12P55289 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
CDH12P55289 RNU6-161P-201ENST00000363051 106 ntBASIC0.14□□□□□ -2.39
CDH12P55289 RNU6-652P-201ENST00000365488 107 ntBASIC0.14□□□□□ -2.39
CDH12P55289 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CDH12P55289 SNORD42B-201ENST00000458893 67 ntBASIC0.14□□□□□ -2.39
CDH12P55289 PVT1_3.1-201ENST00000620853 95 ntBASIC0.14□□□□□ -2.39
CDH12P55289 MIR548BB-201ENST00000626714 66 ntBASIC0.14□□□□□ -2.39
CDH12P55289 Y_RNA.36-201ENST00000362602 112 ntBASIC0.13□□□□□ -2.39
CDH12P55289 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
CDH12P55289 Y_RNA.258-201ENST00000364613 105 ntBASIC0.13□□□□□ -2.39
CDH12P55289 Y_RNA.369-201ENST00000365568 117 ntBASIC0.13□□□□□ -2.39
CDH12P55289 RNU6-154P-201ENST00000384306 106 ntBASIC0.13□□□□□ -2.39
CDH12P55289 MIR193B-201ENST00000384907 83 ntBASIC0.13□□□□□ -2.39
CDH12P55289 RNU6-1177P-201ENST00000391058 104 ntBASIC0.13□□□□□ -2.39
CDH12P55289 RNU6-762P-201ENST00000517107 102 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms