Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNORA19-201ENST00000384737 128 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 SNORA75.1-201ENST00000391130 148 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 RNU6-554P-201ENST00000410466 106 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 RNU6-479P-201ENST00000516348 105 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 RNU6-62P-201ENST00000516526 102 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 MIR4636-201ENST00000582271 80 ntBASIC-0.07□□□□□ -2.42
PDX1P52945 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.07□□□□□ -2.42
PDX1P52945 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 SNORD113-1-201ENST00000365321 69 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
PDX1P52945 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 RNU6-537P-201ENST00000517277 103 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 MIR4802-201ENST00000581881 80 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 AC084368.1-201ENST00000620935 65 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 MIR6514-201ENST00000622549 70 ntBASIC-0.08□□□□□ -2.42
PDX1P52945 RNU6-644P-201ENST00000391155 98 ntBASIC-0.09□□□□□ -2.42
PDX1P52945 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.09□□□□□ -2.42
PDX1P52945 RNU7-159P-201ENST00000459284 62 ntBASIC-0.09□□□□□ -2.42
PDX1P52945 SCARNA23-201ENST00000516060 130 ntBASIC-0.09□□□□□ -2.42
PDX1P52945 RNU6-313P-201ENST00000516317 112 ntBASIC-0.09□□□□□ -2.42
PDX1P52945 RNU6-589P-201ENST00000516485 107 ntBASIC-0.09□□□□□ -2.42
PDX1P52945 RNU6-132P-201ENST00000383863 107 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 RNU6-106P-201ENST00000384405 107 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 MIR590-201ENST00000385008 97 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 MIR451A-201ENST00000385059 72 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 RNU6-65P-201ENST00000516332 98 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 RNU7-188P-201ENST00000517063 64 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 MIR6086-201ENST00000638065 55 ntBASIC-0.1□□□□□ -2.43
PDX1P52945 MIR106A-201ENST00000384870 81 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 RNU2-51P-201ENST00000410708 197 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 MIR5589-201ENST00000579442 60 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 MIR4536-1-201ENST00000583537 88 ntBASIC-0.11□□□□□ -2.43
PDX1P52945 RNU6-834P-201ENST00000362367 110 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 MIR1302-5-201ENST00000408164 150 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 HAR1A.1-201ENST00000459583 118 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 RN7SL660P-201ENST00000614852 299 ntBASIC-0.12□□□□□ -2.43
PDX1P52945 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
PDX1P52945 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.13□□□□□ -2.43
PDX1P52945 MIR548O2-201ENST00000616090 70 ntBASIC-0.13□□□□□ -2.43
PDX1P52945 RNU6-302P-201ENST00000365249 107 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 RNU6-154P-201ENST00000384306 106 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 SNORD4B-201ENST00000459083 72 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 RNU6-109P-201ENST00000516364 107 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 RNU6-184P-201ENST00000516514 107 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 uc_338.10-201ENST00000621872 182 ntBASIC-0.14□□□□□ -2.43
PDX1P52945 RNU7-61P-201ENST00000515897 61 ntBASIC-0.15□□□□□ -2.43
PDX1P52945 MIR3064-201ENST00000581130 66 ntBASIC-0.15□□□□□ -2.43
PDX1P52945 RNU6-54P-201ENST00000365563 107 ntBASIC-0.16□□□□□ -2.44
PDX1P52945 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
PDX1P52945 RNU6-887P-201ENST00000410660 100 ntBASIC-0.16□□□□□ -2.44
PDX1P52945 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.16□□□□□ -2.44
PDX1P52945 CR383656.4-201ENST00000546909 122 ntBASIC-0.16□□□□□ -2.44
PDX1P52945 MIR655-201ENST00000362159 97 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 MIR148A-201ENST00000362215 68 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 MIR216B-201ENST00000390186 82 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 RNU6-519P-201ENST00000410590 108 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 FGF7P7-201ENST00000514120 227 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 RNU6-175P-201ENST00000516896 107 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 AC104996.3-201ENST00000590718 94 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.17□□□□□ -2.44
PDX1P52945 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.18□□□□□ -2.44
PDX1P52945 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.18□□□□□ -2.44
PDX1P52945 SNORD58A-201ENST00000383875 65 ntBASIC-0.18□□□□□ -2.44
PDX1P52945 RNU6-972P-201ENST00000391208 107 ntBASIC-0.18□□□□□ -2.44
PDX1P52945 AL606753.1-201ENST00000427435 87 ntBASIC-0.18□□□□□ -2.44
PDX1P52945 RNU6-766P-201ENST00000362478 107 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 MIR652-201ENST00000385278 98 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 RNA5SP292-201ENST00000390974 118 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 RNU6-719P-201ENST00000516671 104 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 RNU6-762P-201ENST00000517107 102 ntBASIC-0.19□□□□□ -2.44
PDX1P52945 SNORD114-29-201ENST00000364819 70 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 RNU6-811P-201ENST00000384069 107 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 MIR548U-201ENST00000390728 81 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.2□□□□□ -2.44
PDX1P52945 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
PDX1P52945 RNU4-61P-201ENST00000411243 107 ntBASIC-0.21□□□□□ -2.44
PDX1P52945 MIR3140-201ENST00000583685 90 ntBASIC-0.21□□□□□ -2.44
PDX1P52945 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
PDX1P52945 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.22□□□□□ -2.44
PDX1P52945 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.22□□□□□ -2.44
PDX1P52945 RNY4P18-201ENST00000391107 89 ntBASIC-0.22□□□□□ -2.44
PDX1P52945 SNORD90-201ENST00000391145 111 ntBASIC-0.22□□□□□ -2.44
PDX1P52945 U3.27-201ENST00000391237 200 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms