Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNA5SP299-201ENST00000391203 116 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 AL591806.2-201ENST00000433122 173 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 MIR4524B-201ENST00000581569 115 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 RNA5SP215-201ENST00000363440 122 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 SNORD18A-201ENST00000363753 72 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 RNU1-141P-201ENST00000364623 158 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RNF144AP50876 FABP5P4-201ENST00000437203 171 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 U7.7-201ENST00000459276 60 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 AC108210.2-201ENST00000503681 201 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 SCARNA21.1-201ENST00000515996 128 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 RNU6-656P-201ENST00000516785 107 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 RNU6-548P-201ENST00000517083 115 ntBASIC1.59□□□□□ -2.15
RNF144AP50876 RNU6-1079P-201ENST00000362861 110 ntBASIC1.58□□□□□ -2.16
RNF144AP50876 SNORD114-4-201ENST00000363962 75 ntBASIC1.58□□□□□ -2.16
RNF144AP50876 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
RNF144AP50876 RNA5SP47-201ENST00000517230 109 ntBASIC1.58□□□□□ -2.16
RNF144AP50876 MIR6739-201ENST00000622461 75 ntBASIC1.58□□□□□ -2.16
RNF144AP50876 RNA5SP327-201ENST00000362494 101 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 RNU6-829P-201ENST00000363700 112 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 RNU6-1089P-201ENST00000516473 104 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 RNU5B-6P-201ENST00000516765 68 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 SNORA40.17-201ENST00000517256 115 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF144AP50876 AC015712.3-201ENST00000559380 164 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 MIR3678-201ENST00000578455 94 ntBASIC1.57□□□□□ -2.16
RNF144AP50876 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
RNF144AP50876 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RNF144AP50876 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RNF144AP50876 RNA5SP432-201ENST00000362480 116 ntBASIC1.56□□□□□ -2.16
RNF144AP50876 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
RNF144AP50876 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
RNF144AP50876 AC018659.1-201ENST00000551083 169 ntBASIC1.56□□□□□ -2.16
RNF144AP50876 RNU6-1162P-201ENST00000384443 104 ntBASIC1.55□□□□□ -2.16
RNF144AP50876 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RNF144AP50876 RNU6-269P-201ENST00000391077 97 ntBASIC1.55□□□□□ -2.16
RNF144AP50876 MIR548C-201ENST00000384815 97 ntBASIC1.54□□□□□ -2.16
RNF144AP50876 MIR764-201ENST00000390811 85 ntBASIC1.54□□□□□ -2.16
RNF144AP50876 MIR548V-201ENST00000584165 80 ntBASIC1.54□□□□□ -2.16
RNF144AP50876 Y_RNA.250-201ENST00000364542 110 ntBASIC1.53□□□□□ -2.16
RNF144AP50876 RNU6-302P-201ENST00000365249 107 ntBASIC1.53□□□□□ -2.16
RNF144AP50876 SNORA8.2-201ENST00000384372 139 ntBASIC1.53□□□□□ -2.16
RNF144AP50876 MIR3612-201ENST00000579753 87 ntBASIC1.53□□□□□ -2.16
RNF144AP50876 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
RNF144AP50876 Y_RNA.236-201ENST00000364427 111 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 MIR573-201ENST00000384964 99 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 snoU13.13-201ENST00000458842 104 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 RNA5SP484-201ENST00000458857 111 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 MIR4769-201ENST00000584126 77 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.52□□□□□ -2.17
RNF144AP50876 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
RNF144AP50876 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
RNF144AP50876 SCARNA16.5-201ENST00000517114 183 ntBASIC1.51□□□□□ -2.17
RNF144AP50876 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
RNF144AP50876 RNU6-92P-201ENST00000605893 104 ntBASIC1.5□□□□□ -2.17
RNF144AP50876 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
RNF144AP50876 MIR521-2-201ENST00000384818 87 ntBASIC1.49□□□□□ -2.17
RNF144AP50876 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
RNF144AP50876 AL157398.1-201ENST00000452981 186 ntBASIC1.49□□□□□ -2.17
RNF144AP50876 MIR19B1-201ENST00000384829 87 ntBASIC1.48□□□□□ -2.17
RNF144AP50876 MIR200A-201ENST00000384875 90 ntBASIC1.48□□□□□ -2.17
RNF144AP50876 SNORD124-201ENST00000459577 104 ntBASIC1.48□□□□□ -2.17
RNF144AP50876 MIR502-201ENST00000606349 86 ntBASIC1.48□□□□□ -2.17
RNF144AP50876 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RNF144AP50876 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
RNF144AP50876 SNORA67.5-201ENST00000391036 107 ntBASIC1.47□□□□□ -2.17
RNF144AP50876 RNU6-122P-201ENST00000516818 107 ntBASIC1.47□□□□□ -2.17
RNF144AP50876 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 MIR630-201ENST00000384957 97 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 AC021146.9-201ENST00000512503 156 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 RNA5SP227-201ENST00000516184 113 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
RNF144AP50876 RNA5SP99-201ENST00000364020 114 ntBASIC1.45□□□□□ -2.18
RNF144AP50876 MIR3938-201ENST00000582157 103 ntBASIC1.45□□□□□ -2.18
RNF144AP50876 AL162376.1-201ENST00000624117 175 ntBASIC1.45□□□□□ -2.18
RNF144AP50876 RNU1-17P-201ENST00000363022 152 ntBASIC1.44□□□□□ -2.18
RNF144AP50876 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
RNF144AP50876 SNORA75.1-201ENST00000391130 148 ntBASIC1.44□□□□□ -2.18
RNF144AP50876 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RNF144AP50876 RNU6-446P-201ENST00000362827 106 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 Y_RNA.407-201ENST00000383986 113 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 SNORA15B-2-201ENST00000384058 135 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 SNORA15B-1-201ENST00000384334 135 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
RNF144AP50876 SNORD60.1-201ENST00000362451 73 ntBASIC1.42□□□□□ -2.18
RNF144AP50876 MIR517B-201ENST00000385102 67 ntBASIC1.42□□□□□ -2.18
RNF144AP50876 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.42□□□□□ -2.18
RNF144AP50876 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.42□□□□□ -2.18
RNF144AP50876 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.42□□□□□ -2.18
RNF144AP50876 MIR6828-201ENST00000636181 60 ntBASIC1.42□□□□□ -2.18
RNF144AP50876 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RNF144AP50876 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 MIR652-201ENST00000385278 98 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 SNORD113-2-201ENST00000391082 72 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 288.6 ms