Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORD114-11-201ENST00000363738 75 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNU6-704P-201ENST00000364162 103 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 SNORD116-14-201ENST00000383894 92 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 SNORD116-17-201ENST00000383929 92 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 SNORD116-15-201ENST00000384445 92 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 SNORD56B-201ENST00000384713 71 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 SNORD116-19-201ENST00000384729 92 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 MIR451A-201ENST00000385059 72 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNA5SP292-201ENST00000390974 118 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNU6-935P-201ENST00000410371 100 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNU6-904P-201ENST00000516206 101 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 MIR3064-201ENST00000581130 66 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 AC096720.1-201ENST00000604441 183 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 AC103810.7-201ENST00000607821 91 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 MIR6759-201ENST00000638110 65 ntBASIC-0.21□□□□□ -2.44
LIG4P49917 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-81P-201ENST00000365608 104 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-480P-201ENST00000384332 107 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-466P-201ENST00000391224 103 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 AC104692.1-201ENST00000472406 90 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 RNU6-719P-201ENST00000516671 104 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 MIR4280-201ENST00000582178 76 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.22□□□□□ -2.44
LIG4P49917 SNORD114-29-201ENST00000364819 70 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU6-746P-201ENST00000384112 109 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU6-959P-201ENST00000384671 107 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU6-813P-201ENST00000384691 107 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU7-55P-201ENST00000459426 62 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNU6-762P-201ENST00000517107 102 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 RNA5SP169-201ENST00000517268 117 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 MIR4439-201ENST00000583746 80 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 AL365222.1-201ENST00000614661 98 ntBASIC-0.23□□□□□ -2.45
LIG4P49917 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-495P-201ENST00000362995 107 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-476P-201ENST00000384726 107 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-644P-201ENST00000391155 98 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-337P-201ENST00000391243 106 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 AC244090.1-201ENST00000441884 93 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 U6.95-201ENST00000636931 70 ntBASIC-0.24□□□□□ -2.45
LIG4P49917 MIR20A-201ENST00000362279 71 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 RNU6-502P-201ENST00000362419 108 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 RNA5SP98-201ENST00000363158 137 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 RNU6-455P-201ENST00000384681 107 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 MIR548A3-201ENST00000385297 97 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
LIG4P49917 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 MIR4536-1-201ENST00000583537 88 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 AC104996.3-201ENST00000590718 94 ntBASIC-0.25□□□□□ -2.45
LIG4P49917 SNORA63.2-201ENST00000362603 126 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 RNU6-990P-201ENST00000364385 104 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 SNORD58A-201ENST00000383875 65 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 RNU6-106P-201ENST00000384405 107 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 SNORD116-21-201ENST00000384507 92 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 RNU6-35P-201ENST00000384530 107 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 SNORA19-201ENST00000384737 128 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 MIR590-201ENST00000385008 97 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 U3.27-201ENST00000391237 200 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
LIG4P49917 RNU6-554P-201ENST00000410466 106 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 snoU13.17-201ENST00000458802 104 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 FGF7P7-201ENST00000514120 227 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 AC026421.1-201ENST00000519101 163 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 MIR5589-201ENST00000579442 60 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 AC090617.8-201ENST00000623339 167 ntBASIC-0.26□□□□□ -2.45
LIG4P49917 SNORD45B-201ENST00000364617 72 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 AC114755.3-201ENST00000481111 251 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 RNU6-109P-201ENST00000516364 107 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 RNU6-184P-201ENST00000516514 107 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 AP000676.1-201ENST00000533307 52 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 MIR4788-201ENST00000639104 80 ntBASIC-0.27□□□□□ -2.45
LIG4P49917 SNORD115-25-201ENST00000362619 82 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 RNU6-824P-201ENST00000363724 104 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 RNU6-900P-201ENST00000384498 102 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms