Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6-649P-201ENST00000384463 107 ntBASIC0.97□□□□□ -2.25
CLK3P49761 RNU6-540P-201ENST00000384622 101 ntBASIC0.97□□□□□ -2.25
CLK3P49761 MIR644A-201ENST00000385262 94 ntBASIC0.97□□□□□ -2.25
CLK3P49761 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
CLK3P49761 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
CLK3P49761 RNU6-274P-201ENST00000459566 107 ntBASIC0.97□□□□□ -2.25
CLK3P49761 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
CLK3P49761 RNU6-469P-201ENST00000516253 101 ntBASIC0.97□□□□□ -2.25
CLK3P49761 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.97□□□□□ -2.25
CLK3P49761 MIR4773-1-201ENST00000637203 78 ntBASIC0.97□□□□□ -2.25
CLK3P49761 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.97□□□□□ -2.25
CLK3P49761 Y_RNA.258-201ENST00000364613 105 ntBASIC0.96□□□□□ -2.26
CLK3P49761 SNORD28-201ENST00000384706 75 ntBASIC0.96□□□□□ -2.26
CLK3P49761 MIR519E-201ENST00000385075 84 ntBASIC0.96□□□□□ -2.26
CLK3P49761 RNU7-24P-201ENST00000458867 62 ntBASIC0.96□□□□□ -2.26
CLK3P49761 RNU7-74P-201ENST00000459104 62 ntBASIC0.96□□□□□ -2.26
CLK3P49761 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
CLK3P49761 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
CLK3P49761 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLK3P49761 SNORD115-31-201ENST00000365318 82 ntBASIC0.95□□□□□ -2.26
CLK3P49761 SNORD41.1-201ENST00000391000 69 ntBASIC0.95□□□□□ -2.26
CLK3P49761 SNORD75.2-201ENST00000408784 58 ntBASIC0.95□□□□□ -2.26
CLK3P49761 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
CLK3P49761 AC025627.3-201ENST00000582078 182 ntBASIC0.95□□□□□ -2.26
CLK3P49761 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
CLK3P49761 MIR548O2-201ENST00000616090 70 ntBASIC0.95□□□□□ -2.26
CLK3P49761 AC244669.1-204ENST00000621564 178 ntBASIC0.95□□□□□ -2.26
CLK3P49761 RNU6-495P-201ENST00000362995 107 ntBASIC0.94□□□□□ -2.26
CLK3P49761 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
CLK3P49761 SNORD30.1-201ENST00000391309 70 ntBASIC0.94□□□□□ -2.26
CLK3P49761 SNORD45.1-201ENST00000363181 77 ntBASIC0.93□□□□□ -2.26
CLK3P49761 SNORD18A-201ENST00000363753 72 ntBASIC0.93□□□□□ -2.26
CLK3P49761 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLK3P49761 RNU6-663P-201ENST00000391105 106 ntBASIC0.93□□□□□ -2.26
CLK3P49761 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
CLK3P49761 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
CLK3P49761 RNA5SP47-201ENST00000517230 109 ntBASIC0.93□□□□□ -2.26
CLK3P49761 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.93□□□□□ -2.26
CLK3P49761 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
CLK3P49761 U6.111-201ENST00000636093 83 ntBASIC0.93□□□□□ -2.26
CLK3P49761 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
CLK3P49761 SNORD115-22-201ENST00000364456 82 ntBASIC0.91□□□□□ -2.26
CLK3P49761 RNU6-726P-201ENST00000364680 107 ntBASIC0.91□□□□□ -2.26
CLK3P49761 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
CLK3P49761 AC093423.1-201ENST00000440817 142 ntBASIC0.91□□□□□ -2.26
CLK3P49761 AL691482.2-201ENST00000457453 84 ntBASIC0.91□□□□□ -2.26
CLK3P49761 AC125388.1-201ENST00000459631 156 ntBASIC0.91□□□□□ -2.26
CLK3P49761 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
CLK3P49761 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CLK3P49761 Y_RNA.386-201ENST00000383913 105 ntBASIC0.9□□□□□ -2.27
CLK3P49761 RNU6-895P-201ENST00000384125 103 ntBASIC0.9□□□□□ -2.27
CLK3P49761 RNU6-800P-201ENST00000384473 103 ntBASIC0.9□□□□□ -2.27
CLK3P49761 SNORD45A-201ENST00000384512 84 ntBASIC0.9□□□□□ -2.27
CLK3P49761 RNU6-1039P-201ENST00000383931 107 ntBASIC0.89□□□□□ -2.27
CLK3P49761 RNU6-881P-201ENST00000516813 102 ntBASIC0.89□□□□□ -2.27
CLK3P49761 SCARNA16.5-201ENST00000517114 183 ntBASIC0.89□□□□□ -2.27
CLK3P49761 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CLK3P49761 Y_RNA.340-201ENST00000365330 92 ntBASIC0.88□□□□□ -2.27
CLK3P49761 RNU6-1335P-201ENST00000365426 107 ntBASIC0.88□□□□□ -2.27
CLK3P49761 RNU6-54P-201ENST00000365563 107 ntBASIC0.88□□□□□ -2.27
CLK3P49761 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CLK3P49761 RNU6V-201ENST00000384105 107 ntBASIC0.88□□□□□ -2.27
CLK3P49761 MT-TY-201ENST00000387409 66 ntBASIC0.88□□□□□ -2.27
CLK3P49761 RNU6-604P-201ENST00000390917 100 ntBASIC0.88□□□□□ -2.27
CLK3P49761 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
CLK3P49761 NAMPTP3-201ENST00000569273 224 ntBASIC0.88□□□□□ -2.27
CLK3P49761 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
CLK3P49761 SNORD113.1-201ENST00000363280 73 ntBASIC0.87□□□□□ -2.27
CLK3P49761 SNORA8.2-201ENST00000384372 139 ntBASIC0.87□□□□□ -2.27
CLK3P49761 MIR1265-201ENST00000408444 86 ntBASIC0.87□□□□□ -2.27
CLK3P49761 MIR4460-201ENST00000577862 86 ntBASIC0.87□□□□□ -2.27
CLK3P49761 MIR6509-201ENST00000614603 85 ntBASIC0.87□□□□□ -2.27
CLK3P49761 MIR6828-201ENST00000636181 60 ntBASIC0.87□□□□□ -2.27
CLK3P49761 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
CLK3P49761 RNU6-1216P-201ENST00000362590 107 ntBASIC0.86□□□□□ -2.27
CLK3P49761 RNU1-141P-201ENST00000364623 158 ntBASIC0.86□□□□□ -2.27
CLK3P49761 RNU4-45P-201ENST00000365469 141 ntBASIC0.86□□□□□ -2.27
CLK3P49761 RNU6-716P-201ENST00000365621 103 ntBASIC0.86□□□□□ -2.27
CLK3P49761 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
CLK3P49761 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
CLK3P49761 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.86□□□□□ -2.27
CLK3P49761 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
CLK3P49761 RNU6-471P-201ENST00000383944 106 ntBASIC0.85□□□□□ -2.27
CLK3P49761 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
CLK3P49761 RNU6-269P-201ENST00000391077 97 ntBASIC0.85□□□□□ -2.27
CLK3P49761 RNU6-630P-201ENST00000391258 106 ntBASIC0.85□□□□□ -2.27
CLK3P49761 SNORD99-201ENST00000408612 74 ntBASIC0.85□□□□□ -2.27
CLK3P49761 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.85□□□□□ -2.27
CLK3P49761 AC005520.4-201ENST00000604337 90 ntBASIC0.85□□□□□ -2.27
CLK3P49761 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
CLK3P49761 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
CLK3P49761 SNORA25.4-201ENST00000363666 124 ntBASIC0.84□□□□□ -2.27
CLK3P49761 Y_RNA.443-201ENST00000384135 111 ntBASIC0.84□□□□□ -2.27
CLK3P49761 SNORD116-24-201ENST00000384549 92 ntBASIC0.84□□□□□ -2.27
CLK3P49761 MIR7-2-201ENST00000384970 110 ntBASIC0.84□□□□□ -2.27
CLK3P49761 SNORD42B-201ENST00000458893 67 ntBASIC0.84□□□□□ -2.27
CLK3P49761 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CLK3P49761 Y_RNA.205-201ENST00000364128 113 ntBASIC0.83□□□□□ -2.28
CLK3P49761 RNU6-260P-201ENST00000384092 107 ntBASIC0.83□□□□□ -2.28
CLK3P49761 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms