Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD115-25-201ENST00000362619 82 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 SNORD56B-201ENST00000384713 71 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNU6-182P-201ENST00000516970 105 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNA5SP169-201ENST00000517268 117 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 AL353621.2-201ENST00000605340 133 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 RNU6-86P-201ENST00000606534 107 ntBASIC-0.61□□□□□ -2.51
CXCL12P48061 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 RNU6-901P-201ENST00000384593 106 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 RNA5SP266-201ENST00000410273 108 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 snoU13.13-201ENST00000458842 104 ntBASIC-0.62□□□□□ -2.51
CXCL12P48061 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 RNU6-886P-201ENST00000384319 105 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MTND4LP9-201ENST00000427694 174 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MIR4694-201ENST00000578534 80 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 AL035470.1-201ENST00000622571 220 ntBASIC-0.63□□□□□ -2.51
CXCL12P48061 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU7-55P-201ENST00000459426 62 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 AC097510.1-201ENST00000510945 133 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-772P-201ENST00000516042 105 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-65P-201ENST00000516332 98 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-719P-201ENST00000516671 104 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 MIR4536-1-201ENST00000583537 88 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 uc_338.36-201ENST00000622331 158 ntBASIC-0.64□□□□□ -2.51
CXCL12P48061 RNU6-832P-201ENST00000363319 107 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 SNORD50.2-201ENST00000365465 70 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 U3.27-201ENST00000391237 200 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR548E-201ENST00000408287 88 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 SNORD42B-201ENST00000458893 67 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 FGF7P7-201ENST00000514120 227 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR3613-201ENST00000579844 87 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
CXCL12P48061 AL157777.2-201ENST00000258070 137 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 RNU7-85P-201ENST00000458851 63 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 AL513043.2-201ENST00000573941 143 ntBASIC-0.66□□□□□ -2.52
CXCL12P48061 RNY3P2-201ENST00000362918 102 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD114-4-201ENST00000363962 75 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD38.3-201ENST00000516599 73 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR4679-2-201ENST00000578358 77 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
CXCL12P48061 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 SNORD2-201ENST00000459163 69 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 SNORA40.17-201ENST00000517256 115 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 AC068339.1-201ENST00000526965 141 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
CXCL12P48061 RNU6-132P-201ENST00000383863 107 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 SNORA40-201ENST00000388090 126 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-257P-201ENST00000410238 98 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU7-107P-201ENST00000459121 61 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
CXCL12P48061 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 RNU6-476P-201ENST00000384726 107 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
CXCL12P48061 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
CXCL12P48061 MIR3140-201ENST00000583685 90 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 MIR5704-201ENST00000584029 77 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 AC103810.7-201ENST00000607821 91 ntBASIC-0.71□□□□□ -2.52
CXCL12P48061 RNU6-973P-201ENST00000364690 107 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 SNORD57-201ENST00000448188 72 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
CXCL12P48061 MIR4439-201ENST00000583746 80 ntBASIC-0.72□□□□□ -2.52
CXCL12P48061 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 SNORD45B-201ENST00000364617 72 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-813P-201ENST00000384691 107 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR548A1-201ENST00000385041 97 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MT-TQ-201ENST00000387372 72 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 AC021146.6-201ENST00000514659 117 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-346P-201ENST00000516288 111 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNU6-971P-201ENST00000516920 106 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 RNY1P9-201ENST00000532431 109 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR5009-201ENST00000578736 100 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 MIR3064-201ENST00000581130 66 ntBASIC-0.73□□□□□ -2.53
CXCL12P48061 SNORA63.2-201ENST00000362603 126 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms