Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 SNORA26.2-201ENST00000390922 122 ntBASIC0.61□□□□□ -2.31
NPTX2P47972 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
NPTX2P47972 RNU6-1051P-201ENST00000365471 102 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 Y_RNA.388-201ENST00000383919 113 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 FGF7P7-201ENST00000514120 227 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 SNORA25.13-201ENST00000516395 103 ntBASIC0.6□□□□□ -2.31
NPTX2P47972 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
NPTX2P47972 AC093423.1-201ENST00000440817 142 ntBASIC0.59□□□□□ -2.31
NPTX2P47972 AC069271.1-201ENST00000445577 156 ntBASIC0.59□□□□□ -2.31
NPTX2P47972 AC140658.3-201ENST00000567603 271 ntBASIC0.59□□□□□ -2.31
NPTX2P47972 MIR3140-201ENST00000583685 90 ntBASIC0.59□□□□□ -2.31
NPTX2P47972 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
NPTX2P47972 SNORA63.2-201ENST00000362603 126 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 Y_RNA.426-201ENST00000384068 113 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 RNU6-1152P-201ENST00000384576 107 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 MIR489-201ENST00000384923 84 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 RNU6-1052P-201ENST00000411398 104 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 RNA5SP484-201ENST00000458857 111 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 RNU6-719P-201ENST00000516671 104 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 MIR4752-201ENST00000579672 72 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 MIR6515-201ENST00000619843 57 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
NPTX2P47972 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 RNU1-141P-201ENST00000364623 158 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 U3.27-201ENST00000391237 200 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 RNU6-592P-201ENST00000411333 103 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.57□□□□□ -2.32
NPTX2P47972 AC073869.9-201ENST00000641610 120 ntBASIC0.57□□□□□ -2.32
NPTX2P47972 RNU6-242P-201ENST00000384359 107 ntBASIC0.56□□□□□ -2.32
NPTX2P47972 RNU7-171P-201ENST00000459581 62 ntBASIC0.56□□□□□ -2.32
NPTX2P47972 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
NPTX2P47972 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
NPTX2P47972 RNY4P3-201ENST00000365254 95 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 RNU6-1276P-201ENST00000365372 104 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 SNORA24B-201ENST00000384176 131 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 MIR216B-201ENST00000390186 82 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 Y_RNA.607-201ENST00000410597 98 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 NAMPTP3-201ENST00000569273 224 ntBASIC0.55□□□□□ -2.32
NPTX2P47972 RNU2-59P-201ENST00000410482 191 ntBASIC0.54□□□□□ -2.32
NPTX2P47972 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
NPTX2P47972 SNORA70.25-201ENST00000612741 95 ntBASIC0.54□□□□□ -2.32
NPTX2P47972 MIR548O2-201ENST00000616090 70 ntBASIC0.54□□□□□ -2.32
NPTX2P47972 RNU5F-1-201ENST00000362507 117 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 RNU6-624P-201ENST00000363411 107 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 RNA5SP173-201ENST00000364857 136 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 MIR598-201ENST00000384868 97 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 MT-TY-201ENST00000387409 66 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
NPTX2P47972 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 MIR4460-201ENST00000577862 86 ntBASIC0.53□□□□□ -2.32
NPTX2P47972 AC006210.1-201ENST00000424882 111 ntBASIC0.52□□□□□ -2.33
NPTX2P47972 snoU13.17-201ENST00000458802 104 ntBASIC0.52□□□□□ -2.33
NPTX2P47972 MIR6755-201ENST00000619993 66 ntBASIC0.52□□□□□ -2.33
NPTX2P47972 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 RNU6-573P-201ENST00000383938 106 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 Y_RNA.423-201ENST00000384057 113 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 AL450471.1-201ENST00000447509 127 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 AC069503.3-201ENST00000618674 145 ntBASIC0.51□□□□□ -2.33
NPTX2P47972 RNU6V-201ENST00000384105 107 ntBASIC0.5□□□□□ -2.33
NPTX2P47972 SNORD110-201ENST00000408189 75 ntBASIC0.5□□□□□ -2.33
NPTX2P47972 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
NPTX2P47972 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.5□□□□□ -2.33
NPTX2P47972 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
NPTX2P47972 RNU6-208P-201ENST00000362431 107 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 RNU6-161P-201ENST00000363051 106 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 Y_RNA.316-201ENST00000365118 111 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
NPTX2P47972 RNU6-1108P-201ENST00000516308 104 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 SNORA72.7-201ENST00000516349 94 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 MIR4666B-201ENST00000578142 81 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 MIR5706-201ENST00000579841 80 ntBASIC0.49□□□□□ -2.33
NPTX2P47972 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 RNU6-54P-201ENST00000365563 107 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 SNORA2A-201ENST00000383885 135 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 RNU6-787P-201ENST00000384032 107 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 Y_RNA.437-201ENST00000384113 113 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 SNORD77.2-201ENST00000391045 68 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 RNU6-1177P-201ENST00000391058 104 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 RNU5B-6P-201ENST00000516765 68 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 RNU6-557P-201ENST00000516842 110 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 YWHAEP2-201ENST00000580066 112 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
NPTX2P47972 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
NPTX2P47972 RNU6-478P-201ENST00000363904 110 ntBASIC0.47□□□□□ -2.33
NPTX2P47972 RNU6-129P-201ENST00000391022 107 ntBASIC0.47□□□□□ -2.33
NPTX2P47972 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.47□□□□□ -2.33
NPTX2P47972 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
NPTX2P47972 Y_RNA.258-201ENST00000364613 105 ntBASIC0.46□□□□□ -2.34
NPTX2P47972 RNU6-652P-201ENST00000365488 107 ntBASIC0.46□□□□□ -2.34
NPTX2P47972 AC097510.1-201ENST00000510945 133 ntBASIC0.46□□□□□ -2.34
NPTX2P47972 RNU6-848P-201ENST00000515948 107 ntBASIC0.46□□□□□ -2.34
NPTX2P47972 Y_RNA.660-201ENST00000516002 120 ntBASIC0.46□□□□□ -2.34
NPTX2P47972 RNU6-617P-201ENST00000516147 107 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms